Protein

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Genbank accession
WBF82113.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTKYLRLYNKAGTLLKSSGNIEGSTGTIKIENLFPETIYHSGDFLVSWVINGEELNKIPVPEFKTLSGVIDKTIIVYFSDINDENLVSLKGDSAYKIAIDNGFNGSQKEWLESLKGEPGEQGDPGRDGVDITEGGSAYEIALAEGFQGTREEWLESLKGEPGEPGRQGEKGDPGEDGFGVDGASAYEIALENGFVGNIQDFLDSLVGEPGKDGQDGNDGLSAYQIALENGFTGTEQEWLETLKGGLTGTENWQKRKVTSDDGTVITIDKPNLNAPDTYFTNSGFYYVTTSTGFPEGVNANGYVTFLIRNPNYSIMTFQPYNSERVFTKAKLNGNWGYWNEIGGRKEDRITSDYVVEIVMNTIENEINILRSAINEDSMYSEIDYLSYIDSVTDTKYTVTTIPTEDSNGYPIKLNRGYANDDPNDGSLETAREFAIRHNASFVTNASVFDTSTGKLLGRQRDNGTIINNTPHRENYTLTIDSDNTLNAIPSTTNLEDITTSIDALTAFFPIVLNGDKVDPSIYSSIPNTGEKNPRQIIAQKEDGTILVISVQGRGINGQGMDYEDTYRICSELGVKFAYHLDGGGSMQTNVRGSLITNPIDNSGTKERKVKDFLYVTISDDIRKNRSNQKEFSNHSKNISDIQVKMDKLSKDFANIGTIPNVGDFKDTATFVSDANTIRQSGMYWVTNATLNTPKDYSYGLFHWQVNPTSALQMIVPFHINLGETLIRRTNGSMDVWTSWRSGGKDTTNWQKYKLSQDNGDRIRVSDIDPVTLSTGYYQIWRMKNSPVGFDSNAQYWNVDIITAQDNVKQIKATLSATGQEYTRTIHKGNDLGWKFINNEKYGRNDFKLYTIPLMAPFNTANLSVMENNHIVTVRLQGKANSNTNNISDLDVVIGKLPAHIEYPKDFVRCTISSMTKGETEQFIGNLVIDTKGVITVKFNRSGTSNSYFGGSLSFPKGDNKNVAFNSTNTKVYDYPDPNVVSVQGSDYYDGYIFGAITRTKGNVTEIQVIDTNNTSSSFICTNQQDNFSTLVGHGNSLKVVDKINDEYLMYITMTDDPKIVPVFVNTTTKIARVGEGIKTMQDSGGSEKRIISIDRVDKVGSTYELYCLWYGIEFKYIISNINTVESLKGEQVFKLPLERVIEDKKALLNDDSNSIKVYQDNLLDGDTFYITQYGENSSAILEYRVENTMAKSTGKYWYNYRTDAERYEIESIFKINGELYASISQKLFNKSTYDTYVIKVTLNT
Physico‐chemical
properties
protein length:1244 AA
molecular weight: 138807,50160 Da
isoelectric point:4,85856
aromaticity:0,10209
hydropathy:-0,51624

Domains

Domains [InterPro]
DC_0108
STR
2–135
DC_0108 DC_2121 cd19958 PTHR40446 cd19958 DC_0843
DC_1473
STR
119–179
DC_1473 DC_1473
IPR018711
STR
438–616
IPR018711
WBF82113.1
1 1244
Architecture
STR
ATT
STR
STR
STR 2-165 | ATT 166-217 | STR 218-648 | STR 671-1056 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF82113.1
1 1244
Domain Start End Length (AA) Confidence
N-terminal 1 451 451 0,8346
Central domain 452 672 222 0,3895
C-terminal 673 1244 571 0,4421
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-451
Central
452-672
C-terminal
673-1244

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus virus vB_MscM-PMS2
[NCBI] 		3003794 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF82113.1 [NCBI]
Genbank nucleotide accession
OP913465.1 [NCBI]
CDS location
range 18023 -> 21757
strand -
CDS
ATGACAAAGTATTTAAGGCTATATAATAAAGCAGGTACATTACTTAAATCAAGTGGTAATATTGAGGGTAGTACGGGAACAATTAAGATAGAGAATTTATTTCCGGAAACTATCTATCACAGTGGTGATTTTCTTGTTAGTTGGGTAATTAATGGTGAAGAGCTTAATAAAATACCAGTACCGGAATTTAAAACATTAAGTGGTGTTATAGATAAGACTATCATTGTTTACTTTAGTGATATTAATGATGAGAACCTTGTATCATTAAAAGGTGATAGTGCATACAAAATAGCAATAGACAATGGATTTAATGGTAGTCAAAAAGAATGGCTAGAAAGTCTTAAAGGGGAACCCGGTGAGCAAGGAGACCCCGGTAGAGATGGTGTGGATATTACCGAAGGTGGTTCTGCTTATGAAATAGCTTTAGCAGAAGGGTTCCAAGGAACTAGAGAAGAGTGGCTAGAGTCACTTAAAGGTGAACCGGGTGAACCGGGTAGGCAAGGTGAAAAAGGAGACCCCGGTGAAGATGGTTTCGGTGTAGATGGGGCTAGTGCATATGAGATAGCATTAGAGAATGGTTTTGTCGGTAATATACAAGATTTCCTAGATAGCTTAGTAGGGGAACCAGGTAAAGATGGTCAAGACGGAAATGATGGACTATCTGCATATCAAATAGCATTAGAGAACGGATTTACTGGAACAGAGCAAGAATGGTTAGAAACACTTAAGGGTGGACTAACAGGTACAGAAAATTGGCAAAAGAGAAAGGTTACAAGTGATGATGGTACGGTAATAACCATTGATAAACCTAATCTTAATGCACCAGATACTTACTTTACTAATTCCGGATTTTACTATGTAACAACAAGTACGGGTTTCCCCGAAGGTGTTAATGCTAATGGGTATGTAACATTTTTAATTAGGAACCCTAACTACTCAATTATGACTTTCCAACCTTACAATTCAGAAAGAGTTTTTACTAAAGCAAAATTAAATGGTAATTGGGGTTATTGGAATGAAATTGGTGGTCGTAAAGAGGATAGAATAACATCAGATTATGTTGTTGAAATAGTTATGAATACAATAGAAAATGAAATTAATATTTTACGTAGTGCTATTAATGAAGATTCTATGTATAGTGAGATTGACTATTTAAGCTATATAGATAGTGTAACAGACACAAAGTATACCGTTACAACAATACCTACTGAAGATAGCAATGGGTACCCTATAAAATTGAATAGGGGTTATGCTAATGATGACCCTAATGACGGTTCACTAGAAACTGCTAGAGAGTTTGCTATTAGACATAATGCATCTTTCGTTACTAATGCTAGTGTTTTTGATACAAGTACGGGAAAACTATTAGGTAGACAAAGGGATAACGGAACTATCATAAATAATACACCACATAGAGAAAATTATACATTAACTATAGATAGTGATAATACCCTTAATGCTATACCTAGCACTACAAACCTAGAAGATATAACTACTTCAATAGATGCTTTAACAGCATTTTTCCCTATCGTATTAAATGGTGATAAAGTAGACCCTAGTATTTATAGCAGTATACCTAATACAGGTGAGAAAAATCCTAGACAAATTATAGCTCAAAAAGAAGATGGTACAATATTAGTTATATCAGTTCAAGGTAGAGGTATTAATGGTCAGGGTATGGATTATGAGGATACTTACCGTATTTGTAGTGAGTTAGGTGTTAAGTTTGCCTACCATTTAGATGGTGGGGGCTCTATGCAAACCAACGTTAGGGGTAGTTTAATAACAAATCCTATAGATAATAGTGGAACTAAGGAAAGAAAAGTAAAAGACTTTTTATATGTAACTATTAGTGATGATATAAGAAAAAATAGAAGTAACCAAAAAGAATTTAGTAATCACTCTAAAAATATATCCGATATACAAGTAAAAATGGATAAGTTAAGCAAAGACTTTGCAAACATAGGAACAATACCTAATGTTGGTGACTTTAAAGATACAGCTACATTTGTTAGTGATGCTAACACAATTAGACAATCCGGTATGTATTGGGTTACTAATGCCACACTTAATACACCTAAAGATTATAGTTATGGTTTATTCCATTGGCAAGTAAATCCTACTAGTGCTTTACAAATGATTGTACCTTTCCATATAAACTTAGGGGAAACGTTAATACGTAGAACTAATGGTAGTATGGATGTTTGGACTAGTTGGAGAAGTGGTGGAAAAGATACTACTAATTGGCAAAAGTATAAATTATCACAAGATAATGGAGATAGAATAAGAGTATCCGATATAGACCCAGTAACATTAAGTACTGGATATTATCAAATATGGAGAATGAAAAACTCACCTGTTGGTTTTGACAGTAATGCTCAATATTGGAACGTAGATATCATAACAGCACAAGATAATGTAAAACAAATAAAAGCTACATTAAGTGCAACTGGTCAAGAGTATACAAGAACCATTCATAAAGGTAATGACTTAGGTTGGAAATTTATAAATAATGAAAAGTACGGTAGAAATGATTTTAAACTTTACACAATTCCCCTTATGGCACCTTTTAACACTGCTAATTTATCGGTAATGGAAAATAACCATATCGTAACTGTTAGACTACAAGGTAAGGCTAATTCAAATACTAATAATATTTCAGACTTAGATGTTGTAATAGGTAAATTACCTGCACATATAGAGTACCCTAAAGATTTTGTTAGGTGTACAATATCTAGTATGACAAAAGGGGAAACAGAGCAATTCATAGGAAACCTAGTGATAGATACTAAGGGTGTTATAACTGTTAAATTTAATAGGTCAGGTACTTCTAACTCTTACTTTGGTGGTTCATTATCATTCCCTAAAGGAGATAATAAAAACGTAGCGTTTAACTCAACAAATACTAAAGTGTATGACTATCCAGACCCTAATGTAGTATCTGTACAAGGTTCGGATTATTATGATGGGTATATATTTGGTGCTATAACTAGAACAAAAGGAAATGTAACCGAGATACAAGTTATAGATACTAATAATACAAGCAGTAGTTTCATATGTACCAATCAACAAGATAATTTTAGTACTTTAGTAGGGCACGGTAATAGTTTAAAAGTAGTAGATAAGATAAATGATGAGTACCTTATGTACATTACAATGACTGATGACCCTAAAATAGTACCAGTTTTTGTAAATACAACGACTAAGATTGCTAGGGTAGGAGAAGGAATAAAAACTATGCAAGATAGTGGAGGCTCTGAAAAGAGAATAATATCTATAGATAGAGTAGATAAGGTAGGAAGTACTTATGAATTATATTGTTTATGGTATGGTATAGAATTTAAATATATAATAAGTAACATAAATACAGTAGAGAGCTTAAAAGGAGAACAGGTATTTAAGTTACCATTAGAAAGAGTAATAGAAGATAAAAAAGCGTTATTAAATGATGATAGTAATAGTATTAAGGTATATCAAGATAACCTCTTAGATGGAGATACATTCTATATAACACAATATGGTGAAAACAGTTCTGCAATACTAGAGTATAGAGTTGAAAATACTATGGCAAAATCTACAGGTAAATACTGGTATAATTATAGGACTGATGCAGAAAGATATGAAATAGAAAGTATATTCAAAATAAATGGTGAACTATACGCATCTATTTCTCAAAAACTATTTAATAAGAGTACGTATGACACGTACGTCATAAAAGTAACATTGAACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb397136fe67fac73b9fe0ade11dedbb6a099d75384da5a2fff3fa06418779e8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2536
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50