Protein

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Genbank accession
XAO36017.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MEKLVVARPPVVDDAGYWLVDRSAIAGELDFGPIIARACATASASGKAVQFTHGKEYLINSATTVNVTGDLTVLFNGAILRQGTASATLAFQNSAGAAAAVSSVEEVSYNLSVDASTNSRVSKITAPGHTLSVGDVCRIWSDDVVADSDGSNQFRAEYFVVAAVVGADIYSTGTLIENYSTNVYVCSPAKHKLRLDSMRVQSSITPGWNASACTVRGFIAPQITGPCSGTNLNGPYLDITGCYMANVESVIVEYLVNDTSTGSYGYGVNDSGSYGTRIGYLAGYYTRHVFTTTTGGQSVSANDGRWDLRGRSMFMYLDHAIVQGNACGIDTHASTYKFNVGHIVCLQDYRGMGAGGVGLQLRGNSVRVDSVEVVNAKTGLFVSGASKTSDNFISIGHVRVSSRQGSVPINLQGNASTRTKVVIDNLEFDTVHDSVVSVKNANVIIKYISGEFNPYQNGGELFELNTGTVLDVLDGDIYINAGTGHNLALHNDTGTVVRARLRFTASGRVSYLARSASQYDVQSEWDVHADTWSGTPFLGVPEDSAKVRANIRAGATSYPLRYRALTYSTAGAQSVDLQRAGDACIVLRVTASVAGVSLSSVTRGAYPGQQLLINNNTSSASTLAVSNNSSGLLTLGAGVTLAAGAGLLLFWDGSTWRKAGA
Physico‐chemical
properties
protein length:661 AA
molecular weight: 69640,86600 Da
isoelectric point:6,18712
aromaticity:0,08169
hydropathy:0,01014

Domains

Domains [InterPro]
DC_1484
STR
145–648
DC_1484
IPR057996
ENZ
570–657
IPR057996
XAO36017.1
1 661
Architecture
STR
STR 145-657 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO36017.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,9628
Central domain 32 513 483 0,9941
C-terminal 514 661 147 0,7593
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-513
C-terminal
514-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSK2
[NCBI] 		3138289 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO36017.1 [NCBI]
Genbank nucleotide accession
PP541514.1 [NCBI]
CDS location
range 41171 -> 43156
strand +
CDS
ATGGAAAAATTAGTAGTTGCTAGACCTCCAGTAGTTGACGACGCTGGGTACTGGCTAGTGGACCGCTCAGCAATTGCTGGTGAGCTTGATTTTGGCCCCATTATAGCCCGGGCGTGCGCAACTGCGTCAGCAAGCGGTAAGGCTGTACAGTTTACGCACGGTAAAGAGTATTTGATAAACTCCGCGACCACTGTAAACGTAACCGGAGATTTAACTGTACTGTTTAATGGGGCTATACTGCGACAGGGCACTGCATCCGCTACGCTGGCATTCCAGAACTCCGCAGGGGCTGCTGCAGCCGTAAGCTCTGTGGAAGAGGTGTCCTACAATTTGAGTGTGGATGCCAGTACAAATTCTAGGGTATCTAAAATTACAGCCCCTGGTCATACGCTATCTGTAGGGGACGTGTGCCGTATCTGGAGTGATGACGTAGTGGCTGACTCAGATGGGTCAAACCAGTTCCGCGCGGAGTACTTTGTTGTAGCGGCGGTGGTGGGTGCAGACATTTACAGCACAGGAACCCTAATTGAGAATTACAGCACTAACGTTTACGTGTGCTCCCCAGCTAAGCATAAACTCCGATTAGACAGTATGAGGGTTCAGAGTAGTATCACCCCCGGGTGGAACGCTAGCGCCTGCACTGTACGCGGCTTCATTGCACCACAGATAACGGGACCCTGCTCAGGCACTAATCTGAATGGTCCGTACCTTGATATCACAGGATGCTACATGGCTAACGTAGAGTCTGTGATTGTAGAGTATCTAGTAAACGACACCAGCACCGGTAGTTATGGTTACGGAGTAAACGACTCAGGTAGCTACGGGACCCGCATAGGCTATCTAGCAGGATACTACACTAGGCACGTATTTACTACTACTACCGGGGGCCAGTCTGTCTCTGCTAATGACGGCAGGTGGGATCTGCGTGGTAGGTCCATGTTTATGTACTTAGACCATGCTATAGTCCAAGGTAACGCTTGCGGTATTGATACTCACGCCAGTACCTACAAATTCAACGTAGGGCATATTGTGTGCTTGCAGGATTACCGCGGTATGGGTGCCGGGGGTGTAGGCCTACAGTTACGCGGTAACAGCGTACGGGTTGATTCTGTTGAGGTAGTTAACGCCAAGACAGGGCTGTTTGTATCTGGGGCCAGCAAGACCTCCGACAACTTTATAAGTATTGGTCATGTACGTGTTAGTAGTAGGCAAGGCAGTGTACCTATAAACCTACAGGGCAATGCCAGTACCCGAACTAAGGTGGTTATTGATAACCTCGAGTTTGATACGGTACATGATAGTGTAGTGTCTGTGAAGAATGCCAACGTCATTATAAAGTATATCAGTGGAGAGTTTAACCCTTACCAGAATGGAGGGGAGCTGTTCGAGCTGAATACTGGGACGGTCTTGGATGTACTGGATGGGGATATATACATTAATGCAGGCACTGGTCATAACCTGGCCCTGCATAATGATACCGGCACAGTAGTTCGCGCGCGTTTACGATTTACTGCCTCTGGACGTGTATCTTACCTAGCTAGAAGTGCATCTCAGTATGATGTACAATCTGAGTGGGATGTACACGCCGATACTTGGTCTGGTACACCGTTCCTGGGAGTTCCTGAAGACTCAGCTAAAGTTCGCGCCAATATACGTGCTGGTGCTACCTCTTATCCACTGCGTTATAGGGCGCTAACTTACAGCACAGCGGGGGCACAGTCTGTGGATCTACAGCGAGCTGGGGATGCGTGTATAGTACTGAGGGTAACTGCTAGTGTTGCAGGGGTCAGCTTAAGCTCTGTGACCAGAGGGGCATATCCCGGGCAGCAGCTACTTATCAATAACAACACATCCAGTGCCAGTACCCTCGCTGTAAGTAACAACAGCTCAGGCCTACTGACATTGGGGGCTGGGGTTACTCTCGCCGCAGGTGCCGGGCTGCTGTTGTTCTGGGATGGAAGTACCTGGAGAAAGGCTGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad50431b801b014c8aefdff49ad24e338609d9f8fc0fbec52dd13b2ea2de8f6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50