Protein

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Genbank accession
XLY82203.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQEAVIADAVEFFKNFDFESLQNLANQIKADSEAAESSASAAAASENAAKNSEVAAETARDQVQQIINDAGEQSTLLVLAQPGGASSVNTQLDMTVQKYIDNSSPRISDYKVTKGADATLAFAKAFAKAAETTGVVIVDVSCVVDTIAVPSETTIRIADYKTVTHKDNASAHMFILPSDSLIKANNKKGRLRGNSANQSAIRRCISAVGVSNAGVDGVDIRDFNSYGAYFENCEDTFCKNSTIRDITGGAVETAAGQYVTNCLRHESAFNDIRDTGSNGIKFRADTLGQTQGCSSTKDKVYRAGFIGIANGKCQDHVVINAYCESCVDNGCDMNGCDNTRFINCVSVLCQDGFYMGENGINNCHIINCSARKCKRAGVGSLGSLTRCSVINPTIDACGSGIYCSGFVGFKIRDGSITNSVKQTYTDNETGTVKTSTGNGIDLQSNLSGCYQPDISGTTFYGNAGYDIAFGSSGTIGNLMLGECSFQDSAGDGKISYGGATLVDPQIRNSQGYVTETTKEYTITGDGTTKIFRLPLPFTVVNENYKIASITIDTVSTVRWIPGGKTTTDFYIEYGTAPGVKSRIVEVRLENLRPV
Physico‐chemical
properties
protein length:682 AA
molecular weight: 72400,97330 Da
isoelectric point:5,00589
aromaticity:0,07185
hydropathy:-0,15323

Domains

Domains [InterPro]
DC_0313
STR
1–678
DC_0313
IPR012334
STR
201–448
IPR012334
IPR011050
STR
203–558
IPR011050
XLY82203.1
1 682
Architecture
STR
STR 1-678 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLY82203.1
1 682
Domain Start End Length (AA) Confidence
N-terminal 1 195 195 0,9909
Central domain 196 598 404 0,9912
C-terminal 599 682 83 0,9798
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-195
Central
196-598
C-terminal
599-682

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpS_AttikonH6
[NCBI] 		3243733 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLY82203.1 [NCBI]
Genbank nucleotide accession
PP978614.1 [NCBI]
CDS location
range 27575 -> 29623
strand -
CDS
ATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGACCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAACGGCGCTGTCGTAGCGTCTACCGACTACGCGATCCTTTTAAGCGACTCGCTAACCGTTGACGGCCTGGCGCAAGATGTTGCTGAAACTCTGCGCTACTATCAGTCACAGGAAGCCGTGATCGCGGATGCAGTCGAGTTCTTCAAGAACTTTGATTTCGAATCGCTGCAAAATCTCGCCAACCAAATTAAGGCAGACTCCGAAGCTGCGGAATCAAGTGCTTCGGCTGCTGCTGCGTCTGAAAATGCGGCAAAAAATTCAGAGGTTGCAGCGGAGACTGCAAGAGACCAAGTTCAGCAGATCATCAATGATGCTGGAGAACAGTCAACGCTGTTGGTGTTAGCACAACCTGGTGGAGCTAGCTCTGTTAACACGCAGCTAGATATGACAGTACAAAAGTATATTGATAATTCATCTCCGAGAATATCTGATTACAAAGTCACGAAAGGTGCTGATGCAACTCTGGCTTTTGCGAAAGCGTTTGCTAAAGCCGCAGAAACTACTGGCGTTGTAATTGTCGATGTTAGCTGTGTGGTAGATACAATTGCTGTTCCATCAGAAACAACAATCAGGATAGCTGACTATAAGACAGTCACCCATAAAGACAATGCCTCGGCGCATATGTTTATCTTGCCCTCTGATTCATTAATCAAGGCAAATAATAAAAAAGGTCGCTTGAGAGGAAACTCTGCTAATCAGTCAGCTATACGTCGCTGCATAAGTGCGGTTGGCGTTTCTAATGCTGGGGTTGATGGCGTTGATATACGCGATTTCAACAGCTACGGGGCGTACTTTGAAAACTGCGAAGACACCTTCTGCAAAAATTCAACAATACGTGATATCACCGGGGGGGCAGTAGAAACTGCGGCTGGGCAATATGTAACTAACTGCCTGCGTCATGAATCTGCATTCAATGATATCAGGGATACAGGTTCTAACGGTATCAAGTTCAGAGCGGATACTTTAGGTCAAACGCAAGGATGTAGCTCGACCAAAGATAAAGTATACCGCGCGGGCTTTATCGGCATTGCTAACGGTAAGTGTCAGGATCACGTGGTAATAAATGCCTATTGCGAAAGTTGCGTAGATAATGGCTGTGATATGAACGGATGTGATAATACACGGTTTATCAACTGTGTATCAGTTCTTTGCCAAGATGGCTTTTATATGGGTGAGAATGGAATTAACAACTGCCACATCATCAACTGCTCTGCAAGGAAATGCAAACGTGCTGGGGTAGGTAGCCTTGGTTCCCTGACAAGATGCTCAGTTATCAATCCAACTATTGATGCCTGTGGTAGCGGTATCTATTGCTCTGGTTTTGTAGGCTTTAAAATCAGAGATGGCAGTATTACAAACAGTGTAAAACAGACGTACACTGACAACGAAACGGGTACTGTAAAGACGAGCACCGGAAACGGTATCGATTTACAATCAAACTTGTCTGGGTGCTACCAACCTGATATCTCTGGAACTACTTTTTATGGTAATGCGGGTTACGATATTGCCTTTGGTAGTTCTGGTACTATTGGTAACTTAATGCTTGGCGAATGTTCTTTCCAGGACTCCGCTGGTGATGGGAAAATTAGCTATGGAGGAGCTACTCTTGTCGACCCTCAAATAAGGAACTCACAGGGGTATGTTACTGAAACAACTAAGGAATATACAATAACTGGCGATGGTACTACGAAAATATTTAGACTTCCATTACCTTTTACTGTAGTCAATGAAAACTATAAAATAGCATCGATAACAATCGATACCGTTTCAACTGTACGGTGGATCCCTGGAGGAAAAACGACAACTGATTTTTATATTGAATATGGTACAGCACCAGGTGTAAAATCAAGAATAGTCGAGGTTAGACTTGAGAACTTACGTCCTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f60b3aa666d0157c23ce9d22cfbc7e6c03486409332488b81ccdfd1928d415cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against carbapenemase-producing K. pneumoniae clinical isolates Paranos,P., Siopi,M., Skliros,D., Zrelovs,N., Svanberga,K., Kazaks,A., Flemetakis,E. and Meletiadis,J. 2024-12-22 — GenBank