Protein

View in Explore
Genbank accession
XPK41495.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKRRTLLKSLLGLTSLLPVKFAASQNLQGKSIMSDITPNVVVSMPSQLFTMARSFKAVANGKIYIGKIDADPVNTENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYDAYGAQQFYFPNVLKYDPDQALPAFKADLTGPDGADLVGYGDSTVEAELDILTTSNGWYVTPDQFGAKGDGTTDDTAAISAAIAECASTGKTLLLLNKRYVWNGPTISTDKISVMGVRRPSPDATLSKLENGSIIVGTMIFSGTRVQVQNFGVDHGSATFTSGGDALVLSATGKNGLFGIIRNCVGLGRNPSDAYHAILCEGYKYSTVRDIIGCQNLYGYAQKCNYSVSSGVVVKNNQNGIIIKSDSVFGDGSQSILSDAVIDGNGLTSIGVWVFSLDAQLQKVNISNVTSSGCSYDIVVQAAENVINEININNVAASSSRIASICLAGTAVDKIYTANISNVAIGEAAGMLIDAQTCNFLNLTNVTGRITNESTHANDSINIGALVGSSNISNVFPTINYSQDVLAGITYLNNYKNNTLTNYKANVFGVGAPKPGYDTQNIDTNVGSMYLRISATNSSFLRLMPLSNSSITTLNITTQAGGVISPGYTWWLQNASPSFTLSIVPSSGGHIVTSGNSTKVLSGGDKIGFMFDGATWIQI
Physico‐chemical
properties
protein length:664 AA
molecular weight: 70240,30910 Da
isoelectric point:5,46066
aromaticity:0,07982
hydropathy:0,04413

Domains

Domains [InterPro]
IPR009093
ATT
33–145
IPR009093 DC_0685 DC_0524
IPR036730
ATT
34–141
IPR036730 IPR012334
G3DSA:2.170.14.10:FF:000001
Unmapped
34–142
G3DSA:2.170.14.10:FF:000001 IPR011050
IPR036730
ATT
39–141
IPR036730
IPR009093
ATT
45–135
IPR009093
XPK41495.1
1 664
Architecture
ATT
STR
RBD
ATT 33-145 | STR 146-609 | RBD 610-664
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK41495.1
1 664
Domain Start End Length (AA) Confidence
N-terminal 1 200 200 0,9874
Central domain 201 557 358 0,9926
C-terminal 558 664 106 0,9581
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-200
Central
201-557
C-terminal
558-664

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Huey
[NCBI] 		3391565 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK41495.1 [NCBI]
Genbank nucleotide accession
PQ850609.1 [NCBI]
CDS location
range 14343 -> 16337
strand +
CDS
ATGAAAAGAAGAACTCTTCTAAAGTCTTTGCTCGGCCTGACGTCACTCTTACCAGTTAAGTTTGCAGCATCTCAAAACCTGCAAGGTAAAAGTATAATGTCAGACATTACACCCAATGTTGTAGTGAGTATGCCTTCGCAACTCTTCACTATGGCTCGTTCTTTTAAAGCCGTAGCTAATGGAAAGATTTATATCGGGAAAATTGACGCTGACCCGGTAAACACTGAAAACCAGATTCAGGTTTATGTAGAGAACGAAGATGGTTCTCACGTTCCTGTTTCGCAACCAATCATCATTAACGCTGCTGGATATCCGGTATATAACGGACAGATTGCTAAATTCGTTACCGTGCAAGGCCATTCTATGGCTGTTTATGATGCCTATGGTGCTCAGCAATTCTATTTCCCAAACGTGCTGAAGTATGACCCGGACCAGGCATTGCCAGCATTTAAGGCTGATTTGACTGGTCCTGATGGTGCTGACCTTGTTGGTTATGGAGATTCCACTGTCGAGGCAGAGTTAGACATCCTGACTACATCTAATGGGTGGTACGTAACTCCTGATCAGTTCGGCGCGAAGGGTGATGGCACTACCGATGACACAGCGGCGATTAGTGCGGCAATTGCTGAGTGTGCTTCTACAGGGAAAACATTGCTCCTGCTTAATAAACGCTATGTGTGGAATGGGCCAACCATATCCACCGATAAAATATCCGTTATGGGAGTCCGTCGCCCAAGCCCTGACGCGACGCTATCCAAGCTGGAAAACGGCAGCATCATTGTCGGTACCATGATATTTTCCGGAACTCGTGTTCAGGTGCAAAACTTTGGTGTAGACCACGGTTCAGCCACATTCACTTCTGGTGGTGATGCGCTAGTGCTTTCCGCAACTGGAAAGAATGGGCTGTTTGGTATCATCCGAAACTGTGTAGGTCTTGGAAGAAACCCATCTGACGCTTACCATGCAATTCTCTGTGAGGGTTACAAATACTCAACGGTGAGAGATATCATTGGCTGCCAGAACTTATATGGCTATGCACAGAAATGTAATTATTCCGTATCAAGCGGTGTTGTAGTAAAAAACAACCAAAACGGAATAATCATCAAATCAGACAGTGTATTTGGCGATGGAAGCCAATCAATTCTTAGTGATGCTGTTATTGATGGTAATGGATTAACATCTATTGGCGTTTGGGTTTTCTCGCTGGATGCACAACTTCAAAAAGTAAACATAAGTAACGTGACCTCGTCTGGTTGCTCTTATGATATCGTGGTGCAGGCTGCTGAGAACGTCATTAATGAAATTAATATTAATAACGTAGCTGCGAGTTCATCACGCATTGCATCAATCTGCCTGGCTGGAACTGCAGTTGATAAAATTTACACAGCCAATATCAGCAATGTTGCTATAGGTGAAGCAGCGGGAATGCTAATAGATGCCCAGACATGTAACTTCCTTAACCTGACAAACGTAACTGGACGAATAACAAACGAATCAACGCATGCTAACGACTCAATAAACATTGGAGCATTAGTAGGAAGCTCTAACATCAGCAACGTGTTCCCTACCATCAACTACAGTCAGGATGTACTTGCTGGCATTACCTATCTTAATAACTATAAAAACAACACGCTTACCAATTATAAGGCGAACGTGTTTGGTGTTGGGGCTCCGAAACCAGGTTACGACACGCAAAACATTGATACCAATGTCGGAAGCATGTACCTGAGGATCAGTGCAACTAACTCTTCATTCCTGAGGTTAATGCCACTTAGTAACTCATCCATTACGACGCTTAACATCACCACTCAAGCAGGTGGAGTGATAAGCCCGGGTTACACATGGTGGTTACAAAACGCATCACCATCATTCACGCTGTCTATAGTTCCATCATCAGGAGGTCACATCGTCACTTCAGGCAACTCTACCAAGGTGCTTAGCGGTGGAGACAAGATAGGATTCATGTTCGACGGAGCGACATGGATTCAGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
062a2c48a840c50eb1d570c6c87397b2b7a73cb06146d60b6ac1a2558531bc75
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank