Protein

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Genbank accession
UCX15966.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSLTKPRCFRKASYLSQLGTLQNLANTGDDVLVIDVDYEFTNGETVDFKGQLVRIECEAKFIGDGALIFTNMASGSVVEKPFMESKSTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVNDWVKFPGLEALIPQEVKDQYVVSTLYIRDCVGVEVRRAGGLMAAYLFRNCHHCKVIDSDTIIGGKDGIITFENLGGEWGVGNYAIGGRVHYGSVVVCSSFETMEAHRTTVELLV
Physico‐chemical
properties
protein length:239 AA
molecular weight: 26351,70730 Da
isoelectric point:5,05875
aromaticity:0,10042
hydropathy:-0,05105

Domains

Domains [InterPro]
IPR011050
STR
1–220
IPR011050
IPR012332
STR
2–229
IPR012332
IPR015331
RBD
3–220
IPR015331
IPR015331
RBD
3–215
IPR015331
UCX15966.1
1 239
Architecture
STR
STR 1-229 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCX15966.1
1 239
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,2453
Central domain 17 228 213 0,9897
C-terminal 229 239 10 0,0578
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-228
C-terminal
229-239

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAt-pSL2
[NCBI] 		2866659 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCX15966.1 [NCBI]
Genbank nucleotide accession
MZ573924.3 [NCBI]
CDS location
range 40598 -> 41317
strand +
CDS
ATGTCATTAACTAAACCACGTTGCTTCAGGAAGGCAAGCTATCTAAGTCAGTTAGGCACTTTGCAGAATCTAGCTAACACTGGAGATGACGTACTTGTTATCGATGTTGACTACGAGTTCACTAACGGAGAGACTGTAGACTTCAAAGGTCAACTGGTTCGTATAGAGTGCGAAGCTAAGTTCATTGGTGATGGTGCTTTGATCTTCACTAATATGGCTAGTGGTTCTGTGGTAGAAAAGCCTTTCATGGAAAGCAAGTCCACACCTTGGGTTATTTACCCTTGGACAGAAGATGGAAAGTGGATTACAGATGCACAAGCTGTTGCTGCTACATTGAAACAATCTAAGACCGAAGGATATCAACCGGGAGTCAACGATTGGGTTAAGTTTCCCGGACTTGAAGCATTGATACCTCAAGAGGTGAAAGATCAGTATGTAGTGTCTACGCTGTACATCCGTGATTGTGTAGGTGTTGAGGTAAGACGTGCTGGCGGTCTTATGGCAGCTTACTTGTTTCGCAACTGTCACCATTGTAAGGTGATTGATTCTGATACCATCATTGGTGGTAAAGATGGAATCATAACCTTTGAAAACTTAGGTGGTGAATGGGGTGTCGGTAACTATGCCATAGGCGGTCGTGTGCATTATGGCTCAGTAGTGGTGTGCAGTTCCTTCGAAACAATGGAGGCGCATCGCACAACGGTGGAGTTATTGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d9ccf053e4518d2468db5b713adbcb11496ecf43e3c3e795b973ec88295b4be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7075
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50