Protein

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Genbank accession
AXH43493.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGGGKASTPKLLNDNLKSKQYYKVLDLISEGPIWGPIDQSHLSSFLVNKTPITSANGDVNINGVTVAWRPGSETQSPINGFSAIEATTIINTDVTQATPLVRTVTDVDVTRVRFNVGVSSLVEQDSKGNQKETSVTLVLETRVGNAAWNIAETVTITGKQNGEYLEAHVINAPDTKPFDIRVRRITPDSTLDTLVNGTIWNSYVEITDDNLNYPFSAIAGSVIDRDQYTDTPSRTYHLRGLIVDVPDNYDPINRTYSGLWTGGFKAAWTNNPAWLFRALVKNNRYGLSRRAGYIDVDDGSLYILSQYCDQLVDDGYGGREPRMTLNAYITEQASARDILDNIAGMFRGIALWDGMRLAVSIDAPQDPIAAITNANVVDGTFTYSSTKRSDRFNAVVVSWTDPDNGWEQQKEYVSDDDLIARFDYNETTLEAFGCTSRGQAWRAGKWLLETAKRETKKVQFQMARDAIAFTPGDIIELMDNNYVAARLGGRIISHAGAVITVDADLSSVAGSGDSISLVGSNGKLVKYEIKSVAGRVVTLKSTPAWVRDGTVFVISTGQIATRLFRIIGISEAENNSTYTINAAQHDPNKQAIVDEGAVFEIPNDSANGYRVPNIENLRIINTNSETVQVTATWETATTTKKLVFELYVYSMDGKVVAQYETELFRFDFYGIDAGSYTLGVRGRNENGMKGAETQISLVIGAPGAPTYIQWTPGFFSADIVPVMNVTATTDTSFEFWFTGEVRATSIGNVENEAQFLGRASQWTLHALKADTTYYMYVRTKNAFGVSPFVEASGKASSDIPGMIDYIDEQIRESEAFENLTGKIDTNIEGMLQNALDNDASVTHQFQQLGEVRADVIVITTTVASVSEAMAQLETQVQAQIGDLTSAVNEKLTAVVRDDGTASASYTLRVGIQRGDQYYSAGMAVGIEPSGSSYKSTLAFNADQFGIYTGSSAGSYQLAFAALNGQVFLRSAFIQDGSIDNAKIGNYIQSTNYSPNVSGWKLDKGGTFENYGSSGNGAMKLTNVTQSVKDENNVLRVQIGLITGQF
Physico‐chemical
properties
protein length:1047 AA
molecular weight: 114156,74150 Da
isoelectric point:4,78842
aromaticity:0,09265
hydropathy:-0,23992

Domains

Domains [InterPro]
IPR053171
Unmapped
1–839
IPR053171 IPR015406
DC_0014
STR
1–1047
DC_0014
IPR055385
ATT
87–211
IPR055385 IPR032876 IPR055383 IPR057587
AXH43493.1
1 1047
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-86 | ATT 87-211 | STR 212-331 | ATT 332-486 | STR 487-705 | ATT 706-809 | STR 810-1047
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH43493.1
1 1047
Domain Start End Length (AA) Confidence
N-terminal 1 493 493 0,8121
Central domain 494 988 496 0,0988
C-terminal 989 1047 58 0,8427
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-493
Central
494-988
C-terminal
989-1047

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EhrS_49
[NCBI] 		2283026 Uroviricota > Caudoviricetes > Feofaniavirus >
Host Erwinia horticola
[NCBI] 		2290876 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH43493.1 [NCBI]
Genbank nucleotide accession
MH443100.1 [NCBI]
CDS location
range 16654 -> 19797
strand +
CDS
ATGAGCTCAGGCGGCGGCAAAGCCTCAACACCAAAACTGCTGAACGATAATCTAAAATCAAAGCAGTATTACAAGGTTCTCGATTTAATCTCTGAAGGTCCGATTTGGGGGCCGATCGATCAGTCTCACCTCTCATCATTTCTGGTAAACAAAACCCCAATCACCTCTGCGAATGGCGACGTAAATATCAATGGCGTCACCGTTGCATGGCGCCCGGGTTCAGAAACTCAGTCACCAATAAATGGCTTTTCTGCCATCGAAGCAACCACGATCATCAACACAGATGTCACTCAGGCAACGCCGCTGGTGAGGACGGTTACTGATGTCGATGTGACCAGGGTACGCTTTAACGTAGGCGTTTCCTCGCTGGTAGAACAGGACTCCAAAGGAAACCAGAAAGAAACCTCGGTGACCCTTGTTCTGGAAACTCGCGTTGGCAATGCTGCGTGGAATATCGCAGAAACCGTCACGATCACCGGCAAGCAGAATGGAGAGTATCTCGAGGCCCATGTTATTAACGCCCCTGATACTAAGCCTTTCGATATCCGCGTACGCCGAATCACGCCTGACAGCACGTTAGATACGCTGGTTAATGGCACCATCTGGAACAGCTACGTTGAAATCACGGATGACAACCTTAACTATCCGTTTTCAGCCATTGCCGGTTCAGTGATCGACCGCGACCAGTACACCGATACGCCGAGCCGCACTTACCATCTTCGCGGGCTGATTGTTGATGTACCTGATAACTACGACCCCATCAATCGCACATACAGCGGGCTGTGGACTGGCGGCTTTAAGGCTGCCTGGACTAATAACCCAGCATGGTTGTTCCGGGCGCTGGTCAAAAACAACAGGTACGGACTTTCCCGGCGCGCTGGTTACATCGATGTCGATGACGGCTCACTCTATATTCTGTCTCAATATTGCGATCAGCTTGTTGATGATGGGTATGGTGGCCGTGAGCCAAGGATGACGCTTAATGCCTATATCACTGAGCAAGCTTCAGCGCGTGACATTCTGGATAATATTGCCGGGATGTTTCGAGGGATAGCGCTGTGGGATGGTATGCGACTTGCTGTTTCAATTGACGCCCCGCAAGACCCCATCGCCGCTATTACAAATGCCAACGTGGTTGATGGCACTTTCACCTACAGCAGCACGAAGCGATCTGACCGGTTTAATGCCGTGGTTGTGTCATGGACTGACCCGGACAATGGCTGGGAGCAGCAGAAAGAGTACGTATCGGATGATGACCTGATTGCACGGTTCGACTACAACGAGACTACTCTTGAGGCATTCGGCTGCACCTCACGAGGACAGGCATGGAGGGCAGGCAAGTGGCTGCTTGAAACGGCGAAGCGTGAAACAAAGAAAGTGCAGTTCCAGATGGCGCGCGACGCGATTGCCTTTACGCCTGGCGACATCATCGAGCTGATGGATAACAACTATGTCGCGGCGAGACTGGGTGGAAGAATAATCTCCCACGCTGGGGCGGTGATTACCGTTGATGCGGACCTGTCGAGTGTTGCGGGTAGTGGAGATTCAATTTCCCTGGTCGGCTCGAATGGAAAGCTTGTTAAATACGAAATCAAATCCGTAGCCGGTCGTGTAGTGACGCTTAAATCAACACCGGCCTGGGTGAGGGATGGAACCGTATTCGTTATCTCCACCGGCCAGATAGCCACCAGGCTGTTCCGAATCATTGGCATCAGCGAAGCAGAGAATAACTCTACTTACACCATCAACGCCGCACAGCATGATCCAAACAAACAAGCCATTGTTGACGAAGGGGCTGTATTCGAAATCCCGAACGATAGTGCCAATGGTTATCGCGTTCCCAACATTGAAAACCTTCGGATCATTAATACTAATAGCGAGACGGTGCAGGTTACGGCTACATGGGAAACTGCCACCACAACCAAGAAGTTGGTCTTTGAGCTTTATGTTTACTCGATGGATGGGAAGGTTGTCGCGCAGTACGAAACAGAGCTGTTCCGCTTCGACTTTTACGGCATTGATGCCGGCAGTTACACGCTGGGAGTCAGGGGAAGAAATGAGAACGGCATGAAAGGTGCTGAGACTCAAATCAGCCTGGTAATAGGCGCGCCCGGCGCCCCAACTTACATTCAATGGACCCCAGGCTTTTTCTCTGCGGATATTGTGCCGGTAATGAATGTTACTGCCACAACCGATACTTCTTTTGAGTTCTGGTTCACGGGAGAGGTTAGGGCCACCAGTATTGGCAATGTTGAGAATGAAGCACAGTTCCTTGGACGCGCCTCGCAATGGACACTTCACGCGCTCAAAGCTGATACCACCTATTACATGTACGTCCGCACCAAGAATGCTTTTGGCGTGTCGCCATTCGTGGAAGCTTCAGGCAAGGCCTCGTCAGATATTCCGGGGATGATTGACTACATTGATGAGCAGATTCGCGAGTCAGAGGCATTTGAAAACCTGACCGGGAAAATTGATACCAATATCGAAGGAATGCTGCAGAACGCCCTGGATAATGATGCAAGCGTTACGCACCAGTTCCAGCAACTTGGAGAGGTCCGGGCTGATGTCATTGTGATCACCACAACGGTCGCTTCAGTTAGTGAGGCTATGGCCCAGCTCGAAACACAGGTTCAGGCACAGATAGGCGACCTGACGTCGGCGGTAAACGAGAAGCTTACGGCCGTGGTTAGGGATGACGGAACAGCTTCAGCATCTTACACATTGCGAGTCGGTATCCAGCGCGGAGACCAGTATTACAGCGCAGGCATGGCAGTAGGTATCGAGCCATCAGGGAGCAGCTATAAATCAACCCTGGCCTTTAATGCTGACCAGTTCGGCATTTATACCGGTAGCAGTGCAGGCAGCTATCAGCTGGCCTTTGCTGCGCTTAATGGTCAGGTTTTCCTCCGCTCTGCATTTATTCAGGATGGATCAATCGATAACGCGAAGATTGGCAATTACATCCAGTCGACCAATTATTCTCCAAATGTATCGGGATGGAAATTGGATAAGGGAGGAACATTTGAAAACTATGGTTCTTCTGGTAATGGCGCCATGAAATTGACCAACGTCACGCAAAGCGTCAAGGATGAAAACAACGTTCTACGGGTTCAGATCGGATTAATTACAGGGCAATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9f39ac4f3e955e2539e9186114d2187f4ba5c19e87df43af1972d39bd0c8169
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of temperate Erwinia bacteriophages 49 and 59 Zlatohurska,M., Gorb,T., Romaniuk,L., Korol,N., Faidiuk,Y., Kropinski,A.M., Kushkina,A. and Tovkach,F. 2019 31099101 GenBank