Protein

View in Explore
Genbank accession
CAR31287.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKVVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGATTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVNATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDELNIRNHINGMAARPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIYSGTMPFAPIASLSDYSQAPLTIYNAPTGPSAKPAVIAFIRPGNWGAFFGLDTDNKLKWGGGSLGNSSMEIADSSNIMNLWAANPTAPTWNGQTVWRSGNFDPATKVDLNAPNATNGNMIFNRIAGTGSGIASSGRVGAISLQNGATAGAAAAVTFERGGGFFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNSYINQALVQVGLGGVGSYAALAVYDTSAPASSVGPGTILDGSVLFYSSFNANFRSGTKPTGTWRCMGYILNRDGTNPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 102888,20960 Da
isoelectric point:5,71098
aromaticity:0,10685
hydropathy:-0,25280

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009 DC_1357
cd19958
STR
152–231
cd19958
DC_1788
STR
167–701
DC_1788
CAR31287.1
1 964
Architecture
ATT
STR
RBD
ATT 1-210 | STR 211-701 | RBD 747-937 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LMA2
[NCBI] 		549446 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus LMA2 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAR31287.1 [NCBI]
Genbank nucleotide accession
FM201282 [NCBI]
CDS location
range 31670 -> 34564
strand +
CDS
GTGATCACACCCGAACTGATCCCCAGTCCGTTTGCCGCTCAGGGCGATAAAGACCCGATTCCACAAACCTCCTCCACTGGCTTCGCAAACCTTCGCGACGGCTATACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGTGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGTGGTTTGGTAGATGGCATGATCCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCTACTACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTACCAGGCCCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACCACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAATGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGTATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCACTCGGCAACAACTCTTATGTCATCACCGATGAATTGAACATCAGAAACCACATCAACGGTATGGCAGCAAGGCCGGTTTGGGGCGGAAATGAATTCTGGGGGCCGTGGAACTTCAATCCTAACACCAAGCTGACCATCAAAGCCGGCACCCAGGAGACTAGCAGCACTGCGATATACAGCGGAACTATGCCGTTCGCCCCAATCGCATCGCTGTCCGATTATTCTCAGGCCCCTTTGACGATTTACAACGCGCCCACTGGTCCGTCTGCAAAGCCGGCCGTCATCGCGTTTATTCGCCCTGGGAACTGGGGCGCGTTCTTCGGCCTCGACACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAATAGCTCCATGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCTGCCAACCCGACCGCGCCGACTTGGAACGGCCAAACGGTTTGGCGATCCGGAAACTTCGATCCGGCGACTAAAGTGGATCTGAACGCGCCAAACGCCACCAACGGCAACATGATTTTCAACCGCATCGCCGGAACAGGCAGCGGTATTGCTTCGTCCGGCCGCGTCGGCGCAATCAGCCTCCAGAACGGCGCAACGGCAGGCGCGGCCGCAGCCGTAACATTCGAGCGGGGCGGAGGTTTCTTTGTCAACTTCGGCCTGGATACCGACAACGTTCTCAAAGTCGGCGGCGGAAATCTGGGGGCAAACGCCTATCCAGTAATCCATGCCGGAAACTACAACAGCTACATCAACCAGGCACTAGTCCAGGTCGGTCTGGGCGGGGTCGGCTCTTATGCGGCCCTGGCCGTGTACGATACTTCCGCACCGGCATCGTCCGTTGGACCTGGTACCATCTTGGACGGGTCTGTGCTGTTCTACTCGTCATTTAACGCCAACTTCAGGAGCGGGACCAAGCCGACCGGAACCTGGCGCTGCATGGGCTACATACTCAACCGGGACGGCACCAACCCCGATTCTGCGACCCTCTTCCAGCGAGTGACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d66cd4205afbc62fefd1a07ae49cfa5942edf261936e677342164f7da3b8106
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2984
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome and proteome analysis of newly isolated Pseudomonas aeruginosa phages Vanderschaeghe,S. 2008 — GenBank