Protein

View in Explore
Genbank accession
YP_010064539.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKVVSSYESVVRGVSEQVPQQRHPGQHYEQVNMISDPVHGLARRHGSITLDEKLIDSSNLMTPSRVAWARNYREYSFFVAGTEYSLVYQAYERTAGDALPFCFVLNKDTGKFLNVNLVDPAALAPWIDGGVSAITTVGQYVIMAAQKLGPGYSVSDPYTLHSQQGVAWVRGGAYSRTYTLKVTRASDNAQFTATYTTMSSSYPNLLNTSDIPATNPDGTPNKDYQKLVNDRVYAYNSAVNKWVGDAAADIQPQNIAQKLVESLVSQGFTNVGRLGGTVYFDNVKSASADDAGDGSLLRLVFNEVDDVSKLSGVHAPGKVVRIKSKGADPYYMVATGDQSGNTTGSWQTVTWKEAAAQVITPGQVFALGAVSSDGKTFHIASTPAGLAAATGYAVPGYSPSKSGDTSMRGAVPYFFGRRITLLTVFQDRLVIVANGVVFLSKTGDYFNWFRDSAVTVKDDDPIEVYALGAEDDIIRRSVTYSKDLFMFGERKQYAISGRVALTPKTAAIMTAANERDSTYAQPCVVGNLLFYGKYAASTSQKGPSQYAGAVNQFQLGLFQDTPETFKISQQLGLYLRGRPTELAAMSSPSTVFLRTDGYDNGVYVYSFIDQPGSQQRAFDSWSRWEWAPEVGQIIGITVYKATLYAFVLRTRGAETWVACEQFTMDSTLSDRPYLDMQRRAKDYMNNIGFLGKTSNAPANGAVAATGEIMFMGAALSGFDSFWQDMLGGAVDPDAYVGVQFDSYVVPTQPFTRDRNNNSIVNGRLVVTRYSVSVAETGGLMASLRANGSEKQVLYFNGRLVGHSNNLPSRQPVTTTVLNVPAGRSNMEHTIKLQSVRWLPMTITAMEWVGQFFNNARRV
Physico‐chemical
properties
protein length:858 AA
molecular weight: 93775,25530 Da
isoelectric point:8,06379
aromaticity:0,10956
hydropathy:-0,21678

Domains

Domains [InterPro]
DC_0058
STR
1–858
DC_0058
IPR058003
TTP
3–62
IPR058003 IPR058003
YP_010064539.1
1 858
Architecture
STR
STR 1-858
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010064539.1
1 858
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9861
Central domain 161 393 234 0,3657
C-terminal 394 858 464 0,1575
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-393
C-terminal
394-858

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Anchaing
[NCBI] 		2759719 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010064539.1 [NCBI]
Genbank nucleotide accession
NC_054891 [NCBI]
CDS location
range 20366 -> 22942
strand -
CDS
ATGAAGGTCGTTTCTTCTTACGAGAGCGTCGTCCGTGGTGTGTCCGAGCAGGTGCCGCAGCAACGGCATCCGGGCCAGCACTACGAGCAGGTCAACATGATTTCCGATCCGGTGCATGGCCTTGCGCGCCGTCACGGGTCCATCACCCTGGACGAGAAGCTGATCGATTCGTCCAACCTCATGACGCCGAGCCGGGTGGCATGGGCGCGCAACTACCGCGAGTACAGCTTCTTCGTCGCGGGGACCGAGTACAGCCTTGTGTATCAAGCGTACGAGCGCACCGCTGGAGACGCGCTGCCGTTCTGCTTTGTGCTGAATAAGGACACCGGCAAGTTCCTCAACGTGAACCTCGTTGATCCCGCTGCGCTCGCCCCGTGGATCGACGGCGGCGTGTCAGCAATCACGACCGTTGGGCAGTACGTAATCATGGCCGCGCAGAAGCTCGGGCCGGGTTACTCCGTCAGCGACCCATACACGCTGCACAGCCAGCAAGGGGTTGCGTGGGTACGCGGAGGGGCCTACTCCCGCACGTACACCTTGAAGGTGACGCGGGCCTCGGACAATGCCCAGTTCACGGCGACGTACACCACGATGTCGTCCAGCTACCCGAACCTGCTGAACACCTCGGACATCCCGGCGACCAACCCTGATGGAACGCCGAACAAGGACTATCAGAAGCTGGTCAACGACCGCGTGTACGCCTACAACTCGGCGGTGAATAAGTGGGTGGGTGACGCCGCCGCCGACATCCAGCCGCAGAACATCGCGCAGAAGCTCGTCGAGAGCCTTGTGAGCCAGGGCTTCACGAACGTCGGTCGCCTCGGCGGCACGGTGTACTTCGACAACGTGAAATCCGCTTCTGCGGACGACGCCGGCGACGGCTCACTGCTGCGCCTCGTGTTCAATGAGGTGGACGACGTGTCCAAGCTGTCAGGCGTCCACGCACCGGGCAAGGTTGTCCGTATCAAGTCCAAGGGTGCTGACCCGTACTACATGGTCGCCACGGGCGATCAGTCCGGCAATACGACGGGCTCCTGGCAGACGGTGACGTGGAAGGAGGCCGCAGCGCAGGTCATCACGCCTGGGCAGGTGTTTGCCCTCGGCGCGGTGTCCTCGGACGGCAAGACCTTCCACATCGCGTCAACACCAGCCGGTCTGGCAGCCGCCACCGGGTACGCCGTTCCCGGCTACTCCCCGAGCAAGTCGGGAGACACATCCATGCGCGGCGCAGTGCCCTACTTCTTCGGGCGGCGAATCACGCTACTGACCGTGTTCCAGGACCGGTTGGTGATCGTTGCAAACGGCGTGGTGTTCCTGTCCAAGACCGGGGACTACTTCAACTGGTTCCGGGACTCTGCCGTAACCGTCAAGGACGACGACCCCATCGAGGTGTACGCCCTCGGCGCAGAGGACGACATCATCCGCCGCAGCGTCACGTACAGCAAAGACCTGTTCATGTTCGGGGAGCGCAAGCAGTACGCAATCTCCGGGCGCGTCGCGTTGACACCAAAGACAGCGGCAATCATGACCGCCGCCAACGAGCGCGACTCGACGTATGCCCAACCCTGCGTTGTGGGCAACCTGCTGTTCTACGGCAAGTACGCGGCGTCCACCTCGCAGAAGGGTCCAAGCCAGTACGCAGGCGCGGTGAACCAGTTCCAGCTCGGGCTGTTCCAGGACACGCCAGAGACGTTCAAGATCAGCCAGCAACTCGGCTTGTATCTGCGGGGACGGCCTACGGAGCTGGCAGCCATGTCGTCGCCGTCAACCGTGTTCCTACGTACAGACGGGTACGACAACGGTGTGTACGTCTACAGCTTCATCGACCAGCCGGGTAGCCAGCAGCGAGCCTTCGATTCCTGGTCGCGGTGGGAGTGGGCGCCCGAGGTGGGCCAGATCATCGGCATCACGGTCTATAAGGCAACGCTGTACGCATTCGTGCTGCGTACCCGTGGAGCGGAGACGTGGGTTGCTTGCGAGCAGTTCACGATGGACTCCACCCTCTCCGACCGCCCTTACCTCGACATGCAGCGTCGGGCCAAGGACTACATGAACAACATCGGCTTCCTGGGCAAGACCAGCAACGCGCCCGCCAACGGCGCGGTAGCGGCGACGGGCGAAATCATGTTCATGGGTGCGGCACTGTCCGGGTTCGACAGCTTCTGGCAAGACATGCTCGGCGGCGCGGTAGACCCGGATGCCTATGTGGGTGTCCAGTTCGACTCGTACGTGGTCCCGACGCAGCCGTTCACGCGCGACCGGAACAACAACTCCATCGTCAACGGACGGTTGGTGGTGACGCGCTACTCCGTGTCCGTTGCTGAGACGGGCGGTTTGATGGCAAGCCTGCGTGCGAACGGCTCGGAGAAGCAGGTTCTGTACTTCAACGGGCGGCTGGTGGGACACAGTAACAACCTGCCGAGCAGACAGCCCGTGACGACCACGGTGCTCAACGTACCGGCTGGCCGCTCCAACATGGAGCACACCATCAAGCTGCAATCGGTACGTTGGCTGCCCATGACCATCACGGCGATGGAATGGGTCGGTCAGTTCTTTAACAACGCCCGACGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9a559b7a40b23555b8525d9b207b360117ce639d21a74318ea3ad44cfec9b07
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3015
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank