Protein

View in Explore
Genbank accession
XNY56594.1 [GenBank]
Protein name
non-contractile tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKAVAFQKRWEITVSWTGGSASGYYNVPDASSGTESAEWASAPFVVNALINGDPNGSGIGAAITAAGGSISQFEGYMYISGLPNLVVSTSAGDTYAVASGQSRVSQEQDLPAQLPAQADGTMCRVGTASSEEAWYRFDYGSRTWSEVGAYGSITKITNMPRELAADDNIVARDWEGRLAGNSDNNSDPAFIENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVAPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQDGVFTVPAVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENALRVVRGVPDGTYVIGRRYRSAFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQTLRMDLATITVPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 86514,92740 Da
isoelectric point:4,98702
aromaticity:0,08701
hydropathy:-0,22888

Domains

Domains [InterPro]
IPR058003
TTP
4–793
IPR058003
XNY56594.1
1 793
Architecture
TTP
TTP 4-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNY56594.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9904
Central domain 145 343 200 0,3299
C-terminal 344 793 449 0,1221
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-343
C-terminal
344-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_JKT5
[NCBI] 		3386302 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNY56594.1 [NCBI]
Genbank nucleotide accession
PQ735929 [NCBI]
CDS location
range 27169 -> 29550
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATTCAGAGCTTGCTGCAGGGTGTTTCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAACATGCTCAGCGACCCGGTTTCTGGTATCCGTCGCAGACCTCCTGGTGAGATTGTCTGGGAGAGCACGATTGATAATCCGGGGCTTGATTCCCTGTTCACTGAATACGTCGAGCGTGGAACTGACGGCAGGCACTTGCTAATTAATACCAGCAACGGTAACTGGTGGCTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAACGACCCGTACTTCGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATCGCGGGGTTGACTTATATCCTGAATACTGAGATGGCTCCGAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTGAAGGCGGTGGCTTTCCAGAAGCGTTGGGAAATTACCGTGTCTTGGACAGGTGGCTCCGCCTCCGGATACTACAATGTGCCGGATGCCAGCAGCGGCACCGAGTCAGCGGAGTGGGCGTCTGCACCTTTCGTAGTAAATGCACTAATAAATGGAGACCCAAACGGGTCCGGTATAGGGGCAGCTATTACGGCAGCAGGGGGCAGTATAAGCCAATTCGAGGGATATATGTACATATCCGGGCTTCCTAACCTTGTGGTTAGTACATCGGCTGGGGATACTTACGCGGTAGCATCCGGGCAGAGCAGAGTATCACAAGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAGGCTGATGGTACAATGTGTCGTGTAGGCACCGCCTCGTCCGAGGAGGCATGGTATCGGTTTGATTATGGCTCACGCACCTGGTCTGAGGTGGGGGCGTACGGCAGTATAACCAAGATTACGAACATGCCTAGAGAACTTGCTGCAGATGACAATATCGTTGCGAGAGATTGGGAGGGGCGCTTAGCTGGTAACTCTGACAACAATAGTGACCCGGCATTCATAGAGAATGGATACATCACCGGTATTGCAGCTTTCCAGGGCCGTTTAGTTCTGCTCAGTGGCAGTTCCGTAGATATGTCAGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACTTCCCTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCGCAGGATTCTGTGTACCGTACCGCTGTACAGTTTAACCGAGACCTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCTGGTTCGGCAGTACTTACGCCAACTAACGCAAGCATTAGTATTACCAGCACCTACGATTGCGACAGCCGTGTTGCCCCGGTAATGGCGGGGCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATACTGGAGCTAATCCCATCACCTTACACAGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACTAATATGGCCTTCTCACGCATGTCTGGAGAGCGTAATAGCCTGCTGGTATACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGATGAGGTGTTCTTGTACATGCAAGGACCCAGTCCCAGCAACAAGCTTTTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAATACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTACAGGACGGGGTGTTCACTGTTCCGGCGGTACTACGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAACTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACGCCCTACGGGTTGTGCGCGGCGTACCTGACGGCACTTATGTAATCGGACGACGTTACCGCAGTGCGTTCACACTAACTACGCCTATTCTACGGGACCAGAATGACAAGCTCGTGGGGAGTGGGCATGTGCGCCTGCTGCGTCTGGACGTGGCAGTACGTAACTCCGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTCAATTGGGGTGGAGAACTGACAGGTATCTTGATGAACTCAAAGGAGCTGACGCTTGGGCAGACCCTGCGGATGGACTTGGCTACGATTACCGTGCCGTGCCGTACTAACGCAGACACAACCGAGGTGTCACTGTTTACTGATGGTTCTATGGAACTGAATGTGCTGGATATCTCGTATATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8eb40d92b066434128f18a8aea13969d850fc2ed73e57921884237fcd1159cab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2988
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphological and genomic characterization of specific ESBL-producing Klebsiella pneumoniae podoviruses Saharman,Y.R., Safitri,N.A., Pramono,A.K., Safari,D., Saptawati,L., Anggraini,D., Sarassari,R. and Mardiana,M. 2025-12-01 — GenBank