Protein

Genbank accession
YP_011898304.1 [GenBank]
Protein name
head fiber protein
RBP type
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYEPTTWNNDDVITAEKLNKLEQGVKNEQVGPAGPAGPAGPAGPAGAVGPAGPAGAVGPKGDKGDPGAQGPAGPSYTLPAANKTTLGGVKQMALIEDLSTETATDLKDKINAILAGMKKQGIMANS
Physico‐chemical
properties
protein length:127 AA
molecular weight: 12546,99430 Da
isoelectric point:5,01277
aromaticity:0,02362
hydropathy:-0,39134

Domains

Domains [InterPro]
IPR022741
73–125
IPR022741
G3DSA:6.10.140.1630
76–127
G3DSA:6.10.140.1630
YP_011898304.1
1 127
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruminococcus phage phiRg507T2_2
[NCBI] 		2772517 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011898304.1 [NCBI]
Genbank nucleotide accession
NC_104262 [NCBI]
CDS location
range 5537 -> 5920
strand +
CDS
ATGGCATACGAACCAACTACATGGAATAATGATGACGTTATTACAGCAGAGAAACTGAATAAGTTAGAGCAGGGCGTAAAGAATGAGCAGGTTGGACCAGCAGGACCAGCAGGACCAGCAGGACCAGCAGGACCAGCAGGAGCAGTAGGACCAGCAGGACCAGCAGGAGCAGTAGGACCGAAAGGAGACAAGGGAGATCCGGGCGCACAGGGACCTGCAGGACCAAGTTACACTCTTCCAGCGGCGAATAAAACAACGCTCGGCGGTGTGAAACAGATGGCTTTGATCGAAGATTTGTCCACAGAAACAGCAACTGACCTGAAAGATAAAATCAATGCGATTCTTGCGGGGATGAAAAAACAGGGGATCATGGCGAATTCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2df79c89ce61f4e9abaa0562310d15bccebf799ea354fcc07fcba3db30699ce9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8211
Evidence 0,8211
Download PDB

Literature

Title Authors Date PMID Source
Temperate bacteriophages infecting mucin-degrading bacterium Ruminococcus gnavus from the human gut Khokhlova,E.V., Shkoporov,A.N., Draper,L.A., Kingston,A.R., Forde,A., Ross,R.P. and Hill,C. 2023-03-30 — GenBank