Protein

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Genbank accession
XHB26702.1 [GenBank]
Protein name
putative minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANFSYKGVDLSPFLNCLNIVRTIGNNRSVATRKINELGETIQSVSFGAKTIFVTVSFKTKEIGASKFVDTTEPSTYSYENLNKLREKIAGILHSKTTFKLTLPDEPDRYYMAVPKGDIDLKGISDWYDETVIEFYIPDGVAHSTTYKKFLDYTQDGNKLTFKLQNEGNTNALPIIKIKHNSENGYIGIANETGAFALGSSEEEDGTIVHRNEVLFDYSKAIAQALDGAPNVAKLNHMPPTYDTELKRMRIDNILGSGKGGEYVVIGNRGTTPGYTEHVGTRTFIINPDSNGEYTLNEHLWWQQIFIATAQDQKGFLKLCVTGIDDEGNDEFLYGIETYKRKNGFETEYNFFALDDDGVGWRFYKQFKFQADRNYHNPFSMNRSRAVEIFREEDKFRIYFNGAHHHVTVPSLKGKKSRKIHLAMGTCNDSSKYINYNLFEKVNFEKMGVSHYNNIVNKYQPSDEVIINFENDTVKTKELNSLQDMVLGSQPISVPPGESELVIQLSKFSQSAPNVEILMEERWL
Physico‐chemical
properties
protein length:524 AA
molecular weight: 59536,18810 Da
isoelectric point:5,79675
aromaticity:0,11450
hydropathy:-0,51450

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–143
G3DSA:2.40.30.200
DC_0420
STR
1–524
DC_0420
IPR006520
Unmapped
4–143
IPR006520
IPR008841
STR
38–136
IPR008841
XHB26702.1
1 524
Architecture
ATT
STR
ATT 1-143 | STR 144-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB26702.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,8840
Central domain 204 402 200 0,1086
C-terminal 403 524 121 0,6556
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-402
C-terminal
403-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage phiGBSVK-E1_GBSInt8.1
[NCBI] 		3345073 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus agalactiae
[NCBI] 		1311 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB26702.1 [NCBI]
Genbank nucleotide accession
PP766231 [NCBI]
CDS location
range 30264 -> 31838
strand +
CDS
TTGGCAAATTTTAGTTATAAAGGCGTTGATTTATCGCCTTTTTTGAATTGTTTAAACATAGTGAGGACTATAGGTAATAATAGGTCTGTTGCTACCAGAAAAATAAATGAATTAGGAGAAACCATTCAATCGGTTAGTTTTGGCGCTAAGACTATTTTTGTTACTGTTAGTTTTAAAACTAAAGAAATAGGAGCAAGTAAATTTGTAGACACGACAGAACCGTCGACTTATAGTTACGAAAACTTAAATAAATTAAGAGAAAAAATAGCTGGTATTTTGCATAGTAAGACGACCTTTAAACTTACATTACCAGATGAACCTGACAGATATTATATGGCTGTTCCAAAAGGTGATATTGACTTAAAAGGAATATCTGATTGGTACGACGAAACGGTTATTGAGTTTTACATCCCAGACGGCGTTGCACATTCGACTACTTACAAAAAGTTTTTAGATTACACACAGGATGGAAATAAACTAACCTTTAAATTGCAAAACGAAGGTAACACAAATGCGTTGCCAATTATCAAAATAAAACACAACTCCGAAAATGGCTATATTGGTATCGCAAACGAAACAGGTGCTTTTGCGCTTGGATCATCAGAAGAAGAAGACGGGACTATCGTGCATCGCAACGAAGTCCTTTTTGATTACTCAAAAGCGATAGCGCAGGCTTTGGACGGTGCGCCAAACGTTGCAAAACTTAATCACATGCCACCAACATATGACACAGAACTTAAACGGATGCGCATTGATAATATCTTAGGCTCTGGTAAAGGCGGTGAATATGTTGTTATTGGAAATAGAGGCACTACTCCGGGCTACACCGAGCACGTTGGGACTCGAACGTTTATTATCAATCCTGATTCAAACGGAGAATACACTCTCAATGAGCACCTGTGGTGGCAACAGATTTTTATTGCTACTGCGCAGGATCAAAAAGGTTTTTTAAAGCTTTGTGTAACGGGAATCGATGATGAAGGGAATGACGAGTTTTTGTATGGAATCGAAACTTACAAACGAAAAAATGGTTTTGAAACAGAATACAATTTTTTTGCGCTTGATGATGACGGTGTCGGCTGGAGATTTTACAAGCAGTTTAAATTTCAAGCAGATAGAAATTATCACAATCCTTTTTCAATGAATAGAAGTAGGGCGGTTGAGATTTTCAGGGAAGAAGATAAGTTTCGTATTTACTTTAACGGTGCGCATCATCATGTAACTGTTCCATCTCTTAAAGGGAAAAAATCTCGCAAGATACACCTTGCAATGGGGACATGCAATGATAGCTCTAAATATATCAACTACAACCTGTTTGAAAAAGTTAATTTTGAAAAAATGGGAGTATCTCATTACAACAATATCGTCAATAAATATCAACCAAGCGACGAAGTTATTATTAATTTTGAAAATGATACAGTCAAAACCAAAGAGCTTAATTCCTTACAGGACATGGTTTTAGGCTCTCAACCAATATCTGTACCGCCAGGAGAATCAGAATTGGTTATTCAGTTGTCTAAATTTTCTCAGTCTGCACCAAATGTCGAGATACTTATGGAAGAGAGGTGGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a54f7caccccbed9f841b73c3b393ecafbdf0891f68e0abaa551a06f5c09092c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8389
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50