Protein
View in Explore- Genbank accession
- QMV48869.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MILLNKSMRYYVDFDQWGINAFNSNPNETTKGFNEALIYASKNNFPIVEIPKGNFIIDSVNTLNQRNPEVGGGIKIPSNMELLLDPEAVFQVNPNGYQGYSCFYIGLAENVIIRGGHIIGDRYQHDYSLIDTDRKTHEWGFGIHVHGSKNVLIENVKISDCIGDNIWIAAHGMMNYPGMAYTPSKSVTVRKCELKRGRRNNLATNGCEGLLVEDCDIEEAGGDTIGPQLGIDLEGYGENGRKYDHPYELTISDCRFRKNGRGSVTAHTSGKVSIKDNYCDNVISYGYSTDVSIKGNKIINEGESKEYGIDSVGVSSTETSNRIQITDNNIQGFKIGMMIRGKGVSIDNNTVKNASNCAIATHMAEDVSISNNRIQDSDCIQIQVRNSSDIKVSNNKGKGTTSTYAIKVMDSNDVTFINNKFSNLYGGLYCERSQSIRIKKNDFLLSGKGYGIYWDKDSEVFLTRNEIFEPRNVAIMGAADMYNIRISDNQIYNCKAIIAIHLIGGSEHMVRGNEIVFNRDSDQGYGIYLNGTKKVRLIRNDVQGIGSRILSHPFATFNASSTTLIHNTYDSGTPRLALDDTLIDYK
- Physico‐chemical
properties -
protein length: 586 AA molecular weight: 65144,38140 Da isoelectric point: 6,14591 aromaticity: 0,08532 hydropathy: -0,42833
Domains
Domains [InterPro]
IPR012334
STR
20–364
STR
20–364
IPR011050
STR
30–376
STR
30–376
IPR051550
Unmapped
82–520
Unmapped
82–520
IPR006626
Unmapped
108–147
Unmapped
108–147
IPR039448
ENZ
139–298
ENZ
139–298
DC_0453
RBD
210–379
RBD
210–379
1
586
Architecture
STR 20-581 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
586
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 26 | 26 | 0,9507 |
| Central domain | 27 | 575 | 550 | 0,9957 |
| C-terminal | 576 | 586 | 10 | 0,3524 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-26
1-26
Central
27-575
27-575
C-terminal
576-586
576-586
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage vB_BsuS-Goe11 [NCBI] |
2586959 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QMV48869.1
[NCBI]
Genbank nucleotide accession
MT601272.1
[NCBI]
CDS location
range 87794 -> 89554
strand +
strand +
CDS
ATGATATTGTTGAATAAATCCATGCGATACTATGTTGACTTTGATCAATGGGGAATAAATGCCTTTAACTCGAATCCAAATGAAACAACTAAAGGGTTTAATGAGGCTCTTATATACGCATCAAAAAATAATTTCCCCATTGTGGAAATTCCAAAAGGGAATTTTATTATTGATTCAGTAAATACATTAAATCAACGCAATCCTGAAGTGGGCGGGGGAATTAAAATCCCATCAAATATGGAGCTCCTTTTAGATCCAGAAGCAGTATTTCAAGTTAACCCCAATGGGTATCAAGGCTATTCTTGTTTTTATATTGGGCTTGCAGAGAACGTAATAATTAGAGGAGGTCATATTATAGGTGATCGATATCAACATGATTATTCTCTAATTGATACCGATAGAAAAACACATGAATGGGGATTCGGAATACATGTTCATGGGAGCAAAAACGTTTTGATTGAAAATGTAAAAATCTCAGATTGTATAGGAGACAACATTTGGATTGCAGCACACGGAATGATGAATTATCCAGGGATGGCTTATACACCTTCCAAAAGTGTGACCGTAAGAAAATGTGAACTGAAAAGAGGGAGACGGAACAATTTAGCTACTAACGGTTGTGAAGGATTATTGGTTGAAGACTGTGATATAGAGGAAGCTGGAGGAGATACAATTGGCCCTCAACTAGGTATTGATTTAGAGGGCTACGGAGAAAACGGAAGAAAGTATGATCATCCTTATGAGTTAACGATATCGGATTGCAGGTTTAGAAAAAATGGTCGTGGTTCGGTTACTGCTCATACAAGCGGTAAAGTTTCCATCAAAGATAACTACTGTGACAATGTTATTTCATATGGCTACAGTACAGATGTGAGTATTAAGGGTAACAAGATAATAAATGAAGGGGAATCTAAAGAGTATGGAATAGACTCTGTAGGCGTTTCGAGCACTGAGACTAGCAACAGAATTCAAATAACTGATAACAATATTCAAGGGTTTAAAATAGGCATGATGATTAGAGGAAAAGGGGTATCGATTGATAATAATACCGTAAAGAACGCTTCAAATTGTGCAATAGCAACACATATGGCCGAAGATGTTTCCATTTCAAACAACAGAATACAGGACAGCGATTGTATTCAGATCCAGGTGAGGAATTCATCAGATATTAAAGTGAGCAATAATAAAGGGAAAGGGACAACCTCGACATATGCGATTAAAGTGATGGATTCTAATGATGTCACCTTTATAAACAATAAGTTCTCCAATCTATATGGAGGTCTATATTGTGAAAGGTCACAGTCCATCAGAATTAAGAAAAATGATTTCTTATTAAGTGGAAAAGGTTACGGGATATATTGGGATAAAGATTCAGAAGTCTTCCTGACAAGAAACGAGATATTTGAACCAAGAAACGTTGCAATTATGGGGGCAGCTGATATGTACAATATCAGAATAAGTGATAACCAGATATATAATTGCAAAGCAATCATTGCGATCCACTTAATAGGCGGTTCTGAGCATATGGTTAGAGGAAATGAAATCGTGTTTAACAGAGATTCAGATCAAGGCTATGGAATATATTTAAACGGGACAAAAAAGGTTCGATTAATTAGGAACGATGTTCAAGGTATTGGTTCAAGAATTCTTTCGCACCCATTTGCAACGTTTAATGCTTCCAGTACAACTTTAATACATAATACATACGACAGCGGGACACCTAGATTAGCCTTAGATGATACACTAATCGATTATAAATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
70760d98f6e02e9f172df5f8e1e1601e6d8f2a85707a74b62d55c14149765e86
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50