Protein

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Genbank accession
YP_009787340.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MADITQQWFLDASVGLNFNTMHIWDGDNDANRVYELNFSGGYIYRTDVKAFMVDNATQVRTDLDVTFIGDNTVTLSAAVPLDSKVTIFRDTNKVLPLAQFTDGAIITAGNLDRNAKQAVFASAEMVDRFESVGPIVGDAISIAQEAKDIAEEALENSQNSGGEANTEALRVATEARTIAQASNNTANSALTTSNNAMNTANLALIEAGTAASAVSNQLAGIYGFSHVGGSQSVRMTLAQAKAYTGFTEGLRVFVTDLGFTYKFTASRNIVPGHSISAAVLDDEVHKMVSAGGMLEFDDYGRLSQIESQNYSAYLAKVRTNAAIGLVCYGDSITWGQRPDGGQFPNNYPAQIVSTMSSRTQSSWTVANMASPGDTALVNYRRTMADGQIGDVSTIMLGVNDIKTATNNGNTPEGIVGSTLYGVKNYALVMRKFVARELLRGRCVLVLGTTQWVGGANLSPLGGYIECYLSDAYDGAARTVAEQFGCMFVDTMQDVIKQFGISESCHDGVHLREDFLPIIGKRFAAVFLHQDYKNPCKLKSGDVFIPNYFFNPVSSNRTIQRNTFTNGSSPPLGGGVLAPEAVGVMLPNMAAGGSVTFAFYVDTDSLVIYPTLNADSAYSFDLILDDGATQPDYPSDVEIIPVLRDRQYIVSGRSVSGSTKKSRTTEKYSVNRVNGCYMHVTTRGWHTLTFAMGANAGDVAVEGLVCDSWSNVKNNDVFGGVSGAVYYKDAVAEVTGFLTTAVQVATGVYDVSMSNLVPENYRVHVECTEDVDYVQWRLIFKAEGGFRLHFYDKDNVLVDPTSFRATVIGGR
Physico‐chemical
properties
protein length:810 AA
molecular weight: 87460,97660 Da
isoelectric point:4,92995
aromaticity:0,09506
hydropathy:-0,07938

Domains

Domains [InterPro]
DC_1510
STR
3–504
DC_1510 DC_0735
Coil
Unmapped
140–160
Coil SSF52266
IPR036514
STR
325–526
IPR036514
IPR013830
ENZ
327–510
IPR013830
YP_009787340.1
1 810
Architecture
STR
RBD
STR 3-526 | RBD 527-784 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009787340.1
1 810
Domain Start End Length (AA) Confidence
N-terminal 1 415 415 0,7417
Central domain 416 634 220 0,6354
C-terminal 635 810 175 0,9637
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-415
Central
416-634
C-terminal
635-810

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP2
[NCBI] 		1897743 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Wanjuvirus
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009787340.1 [NCBI]
Genbank nucleotide accession
NC_047778.1 [NCBI]
CDS location
range 34511 -> 36943
strand +
CDS
ATGGCCGACATTACACAGCAGTGGTTTTTGGATGCAAGCGTTGGGTTGAACTTTAACACTATGCACATATGGGACGGCGACAACGACGCAAACCGGGTGTATGAGCTTAACTTCTCAGGCGGGTACATCTACCGCACAGATGTGAAAGCATTCATGGTAGACAACGCGACGCAGGTACGCACTGACCTTGACGTTACTTTCATTGGTGACAACACTGTGACGCTGAGCGCTGCTGTTCCTCTGGATAGCAAGGTTACTATCTTCCGGGACACTAATAAAGTCCTGCCGCTGGCGCAGTTCACAGACGGAGCTATCATCACGGCAGGTAATCTTGACCGAAACGCTAAGCAGGCTGTTTTTGCTTCTGCGGAGATGGTTGACCGTTTTGAGTCAGTTGGGCCTATCGTTGGTGACGCGATTTCTATTGCACAGGAGGCGAAGGATATCGCGGAGGAAGCTCTGGAAAACTCCCAGAATTCAGGTGGAGAGGCAAATACGGAAGCGTTACGCGTTGCAACAGAGGCGCGAACTATTGCACAGGCGAGTAACAACACCGCCAACTCTGCATTAACAACATCCAACAACGCCATGAACACCGCCAACCTCGCGTTAATAGAGGCAGGTACTGCGGCCTCCGCTGTGTCTAATCAACTGGCAGGTATCTACGGGTTCTCCCATGTAGGTGGTTCACAGTCGGTTAGAATGACACTGGCGCAGGCTAAGGCGTACACAGGATTCACTGAGGGTCTCCGTGTATTCGTAACAGACCTCGGATTCACCTACAAGTTCACAGCGTCTCGTAATATCGTACCGGGACACTCAATCTCTGCTGCTGTTCTTGATGACGAAGTTCACAAGATGGTTAGCGCAGGAGGTATGCTGGAGTTTGATGACTACGGCAGACTCTCTCAGATTGAGTCCCAGAACTACTCGGCATACCTCGCTAAAGTGCGCACAAATGCGGCTATTGGTCTGGTGTGTTATGGTGATAGTATTACGTGGGGGCAGCGCCCTGATGGCGGACAGTTCCCAAATAACTACCCCGCTCAGATTGTAAGCACCATGTCTTCCCGTACTCAGTCTTCATGGACAGTCGCCAACATGGCTTCTCCGGGAGACACTGCACTGGTAAATTATCGACGCACCATGGCAGATGGGCAGATTGGGGACGTGTCCACTATTATGCTCGGTGTTAATGACATCAAGACTGCCACGAATAACGGGAACACACCTGAAGGTATCGTGGGAAGCACCTTGTATGGCGTTAAGAACTACGCTCTTGTCATGCGTAAGTTTGTAGCGCGGGAGTTACTGCGAGGTCGCTGTGTGTTGGTGCTTGGAACTACGCAATGGGTAGGTGGGGCTAACCTGTCACCTTTGGGTGGTTATATTGAGTGTTACCTGTCGGATGCCTACGACGGAGCGGCCCGTACGGTTGCAGAGCAGTTTGGGTGTATGTTTGTGGACACCATGCAGGATGTAATCAAGCAGTTTGGTATCAGCGAATCTTGTCACGACGGGGTGCATCTTCGTGAGGACTTCCTGCCGATTATTGGCAAGCGGTTTGCGGCGGTGTTCTTACATCAGGACTACAAGAATCCATGCAAGCTGAAGTCTGGGGATGTATTTATCCCTAACTACTTCTTCAATCCGGTGTCCTCTAACCGAACTATCCAGCGTAACACATTCACAAACGGCTCTTCCCCTCCACTCGGTGGTGGTGTACTCGCACCCGAGGCGGTAGGTGTTATGTTGCCCAACATGGCAGCAGGTGGTAGTGTTACGTTCGCTTTCTATGTGGACACAGACAGTCTGGTAATCTACCCGACGTTAAACGCAGATTCGGCATACTCCTTCGACCTGATTCTGGACGATGGCGCAACACAGCCGGACTACCCTTCAGACGTCGAGATTATCCCGGTGCTTCGTGACCGTCAGTACATTGTATCTGGGCGCTCCGTGAGCGGTTCTACTAAGAAGAGCCGCACAACTGAGAAGTACTCGGTTAACCGGGTCAACGGCTGCTACATGCACGTAACCACCCGAGGGTGGCACACACTTACTTTCGCTATGGGTGCCAACGCAGGTGACGTCGCTGTTGAAGGTCTGGTCTGCGACAGCTGGTCTAACGTCAAGAACAATGATGTGTTCGGAGGTGTATCTGGTGCTGTTTACTACAAGGACGCTGTAGCAGAGGTTACAGGTTTCCTGACTACTGCAGTACAGGTGGCCACTGGTGTATACGACGTTAGCATGAGTAACCTCGTACCGGAGAACTACCGAGTACACGTAGAGTGTACTGAAGATGTGGACTACGTGCAGTGGCGGTTAATCTTCAAGGCGGAAGGTGGATTCCGGTTGCACTTCTACGATAAAGACAACGTGTTGGTAGACCCAACGTCATTCAGGGCCACTGTTATCGGAGGCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
726dcd65e3ad78fc402e3fbd6139c2ea4bcb5e4db53121029a6bc169f5e0493b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6996
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50