Protein

Genbank accession
AFI55454.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGIENSELLEDIVGIINKRSTTSDTRFKYSLDIIANDSTVSVLKVHTLDITRDFVSRYGDYMILAVSINRLEYDALIYPNREDLTATLTVESVHDKTGIAGGDKAVSRYRVKLTDAVDDGLVYGDTTATSDSEKSQEIKDVTIQLMDLNLEKLRLKDITGIIRDTKVLDLLNVVMSDRGEYSVDVYPPDKINNITQLVVGGQESIAIADFPSWLQKYGGGVYNHNIGFYCYNGWVYVYPLFKVDRDPKRRKLVLCSVGPTQLMGIDNTYSVEPGKLSIISSGKVEMEDTTDKLTYNLGNGVKFNIPNFLRDGVTHDSGVTTVTGSGLRTHGINNEVLNNVKSYKLITNNPFYEISRVNSNRGIRASFTWENANPSLIYPNMEVTVLYKTGDTTHSLKGIVIGMDYQSSIGENEATNPTHTGNAILHLFLDKNVI
Physico‐chemical
properties
protein length:434 AA
molecular weight: 48285,94570 Da
isoelectric point:5,29600
aromaticity:0,08065
hydropathy:-0,25783

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Halocynthia phage JM-2012
[NCBI] 		1173297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halocynthia roretzi
[NCBI] 		7729 Eukaryota > Metazoa > Chordata > Tunicata > Ascidiacea > Stolidobranchia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFI55454.1 [NCBI]
Genbank nucleotide accession
JQ340088 [NCBI]
CDS location
range 163161 -> 164465
strand -
CDS
ATGGGTATTGAAAACTCAGAACTTCTAGAAGATATAGTCGGGATTATAAATAAACGCTCTACAACAAGCGATACGAGGTTTAAATATAGTTTAGACATAATCGCTAATGATTCAACTGTTAGTGTCTTAAAAGTTCATACATTAGATATTACTAGAGACTTCGTTAGTAGATACGGTGACTATATGATTCTGGCGGTTAGTATTAATCGTCTCGAATATGATGCACTTATCTACCCTAACCGAGAAGACTTAACAGCTACCTTAACCGTAGAATCAGTCCACGATAAAACAGGTATAGCTGGTGGAGATAAAGCAGTTAGTCGGTATAGGGTTAAATTAACAGATGCTGTAGATGACGGTTTAGTTTATGGAGATACTACTGCTACTAGCGATTCTGAAAAGTCTCAGGAAATTAAAGACGTTACTATTCAGTTAATGGATTTAAATCTTGAGAAATTAAGACTCAAAGATATAACGGGTATTATTAGAGATACTAAGGTACTAGACTTACTTAATGTTGTGATGTCTGATAGAGGAGAATATTCTGTTGATGTATATCCTCCAGACAAAATTAATAACATTACTCAGTTAGTTGTAGGCGGTCAAGAAAGTATAGCTATAGCAGACTTTCCTAGTTGGTTGCAGAAATACGGTGGTGGTGTTTATAATCACAACATCGGTTTTTACTGCTATAATGGATGGGTATATGTTTATCCTTTATTTAAAGTAGATAGAGACCCCAAACGACGTAAGTTAGTATTATGTAGTGTAGGTCCAACTCAGTTAATGGGAATAGATAATACTTATTCTGTTGAACCCGGTAAGTTATCTATTATCTCATCTGGTAAAGTTGAGATGGAAGATACTACGGATAAATTAACTTATAACTTAGGTAACGGTGTTAAATTTAATATACCTAACTTTCTAAGAGATGGTGTAACTCATGATTCTGGCGTCACCACTGTAACGGGTTCTGGTTTACGTACTCACGGAATCAATAATGAAGTACTTAATAATGTTAAGTCTTATAAGTTAATAACTAATAATCCATTCTATGAGATAAGTCGAGTTAATAGTAATCGTGGTATTCGTGCATCATTCACATGGGAAAATGCTAATCCTTCTCTTATATATCCTAATATGGAAGTTACTGTTCTATATAAGACAGGTGATACTACTCATAGTCTAAAGGGAATCGTTATAGGAATGGATTACCAATCATCTATAGGTGAGAATGAAGCCACAAACCCAACACATACAGGTAATGCTATACTTCATTTATTCTTAGATAAAAACGTTATCTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
df52639b8ce81692c8d800de1bb90eef43b98518cfa804361b900c4d9b288f4f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5949
Evidence 0,5949
Download PDB

Literature

Title Authors Date PMID Source
Bacteriophage from diseased seasquirt, Halocynthia roretzi, showing soft tunic syndrome Mun,J.Y., Jang,H.N., Ha,M.A., Nho,S.W., Cha,I.S., Park,S.B., del Castillo,C.S., Jung,C.Y., Kim,Y.K., Kim,Y.R., Aoki,T.T. and Jung,T.S. 2012 — GenBank