Protein

View in Explore
Genbank accession
YP_010073622.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MAVAGPWIGTSALAQTGDHWMGGAAQRLRMGIPFWMSNMIGRSVEVIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSRDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGWAAGAIGASDGGVCIQNDIGGRLRINNGGAIAGGGGGGGGYSQANNWAGKYVCGGGGGRPFGLGGNNGARWPGGNASLTSPGAGGNTGTGYYAGGGGEVGQPGQYANPGAGYSTPPTNPGAAVAGSAPTWQNVGAIYGSRV
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26126,54360 Da
isoelectric point:7,74365
aromaticity:0,10425
hydropathy:-0,20502

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–136
DC_2135
YP_010073622.1
1 259
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-136 | RBD 137-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PP01
[NCBI] 		2060720 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010073622.1 [NCBI]
Genbank nucleotide accession
NC_054930.1 [NCBI]
CDS location
range 157943 -> 158722
strand +
CDS
ATGGCAGTAGCAGGACCGTGGATAGGAACTTCTGCATTGGCACAGACTGGAGACCATTGGATGGGTGGTGCCGCACAGAGATTGAGAATGGGAATTCCGTTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAGTAATTCACACACTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATTACTGGAGATTTAGTATCATATTCTAGAGATGTTCCTTTATTCTTCATGTACGGAGATACACCTAATGAATACGTTCAACTGAACATACACGGCGTAACGATGTATGGACGTGGCGGTAATGGTTGGGCCGCTGGTGCAATTGGAGCATCTGATGGCGGTGTATGTATCCAGAATGATATAGGTGGACGTCTGCGAATTAATAATGGCGGAGCTATTGCCGGTGGCGGCGGTGGCGGCGGTGGTTATTCACAAGCCAACAACTGGGCGGGAAAATATGTTTGTGGCGGCGGTGGCGGTCGTCCATTCGGCTTAGGCGGAAATAATGGTGCTCGATGGCCTGGTGGTAATGCTAGTTTGACGTCTCCGGGTGCTGGCGGTAATACTGGTACAGGGTATTATGCAGGTGGCGGTGGTGAAGTTGGTCAGCCAGGACAATATGCTAATCCAGGTGCTGGTTATTCAACACCTCCGACAAATCCTGGTGCTGCTGTAGCAGGATCAGCACCAACATGGCAGAATGTTGGTGCTATATATGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61377fddf26861fd4a70ed79a5765bd6a2bd9dbef547ef4d0f25043e9cf7ea6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8589
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Escherichia phage PP01 and T2 Hoshiga,F., Yoshizaki,K., Miyanaga,K. and Tanji,Y. 2019-02-01 — GenBank