Protein

View in Explore
Genbank accession
XFC52448.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTKPNFPLGLESQDQSVFQEGILNNGVVEHGPDAVMTVPETPDASGVPSAVRYNEDDDQFEGYYNEGGWLPLGGGNGGRWELLPHAPSSLLQIGRAYLVDNIDGASTVVFPSPKRVGDSITVCDLFGKFSTYPLTVDGNGKSIYGSADSMTISTDNVSATFTWTGEARGWVITSGVGLGQGRVYSREIYSQILSATTPSITLSTQPSIVDVYVDGKRLKESLYTLDGYEVKFDPALASGSDVQIIQYIPIQLGAGGGGSGGTVITWEYNGGSAIGGETQIVLDVVVDSVSEIYIRGSRQQIGRGFTFDPATSTITLADELEAGDDVVVVINGDPTVYNQIDRSPQEVARANNVKNSEVILSTETNTVLDGKNIVYDVVAQTSWRIPTGIPAGAKINRVIGNILVYTPGNVSVNLIEIPSAYSLKSQLGSDYGSFLLNAKRKPLGEAVLAVSTAGLLYSSSWVSIMEYAHLVTNRPDPNDQTTWVWDPAIHAYLDDTGILINQTPVNSNMKAKFPLVFPPGVFKIENSYLLERIAGSTGSLATIFMFIGSGMTSTIIQPMTEGQIAFTVQDCKINFRDIGFRSGADYQTCLVLGNKTLWKPVFHCNMTRVGASGFGKGLVIYLAFDSTFEDIFVQNISKMDVTGTQVSYGITIEKYEGPANGGTAGDGTGDDSNQLVFIRPTVETAKADNSILFNVAGRSTSLPHHAINLFGGHFETHNLKAKLLNLAFGYNVNMFGTVFSQNGPTIDSDNNPITTVYRGVYIENSQNVNMFGCRIGTTNRLASVGVSDTKFIKITGTSQNVNLINTHLIGPYNDISSERHNIDNIIDYSEATKGIKSFTVQGVTAGDYTSRPITKDIRISSLDGKKEYSFYTDNSGVLHLSYSTNIADSSTPTDLMTMDTSGNILTAADLTLGALAGTAATRRLSGNGGYIAFDTIGRVYFNAVSNSQQWVMGSAAFNPTTDNAFTLGQSGFRISASFVVKRQYTATVYDSAGNGSPEGVVTAGVGSTYRRLDGTAGTCFYVKESGTGNTGWVAK
Physico‐chemical
properties
protein length:1039 AA
molecular weight: 111288,08550 Da
isoelectric point:4,94456
aromaticity:0,09240
hydropathy:-0,11482

Domains

Domains [InterPro]
DC_1946
ATT
1–819
DC_1946 DC_2009
G3DSA:3.30.2020.50
ATT
339–422
G3DSA:3.30.2020.50
XFC52448.1
1 1039
Architecture
ATT
RBD
ATT 1-819 | RBD 999-1039
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC52448.1
1 1039
Domain Start End Length (AA) Confidence
N-terminal 1 480 480 0,9963
Central domain 481 844 365 0,9810
C-terminal 845 1039 194 0,8846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-480
Central
481-844
C-terminal
845-1039

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage FKP14
[NCBI] 		3237191 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC52448.1 [NCBI]
Genbank nucleotide accession
PP974339 [NCBI]
CDS location
range 137997 -> 141116
strand +
CDS
ATGGCTAATAAACCCACGAAACCAAATTTTCCGCTTGGGCTTGAATCACAAGATCAATCCGTATTTCAAGAAGGTATTCTGAATAATGGTGTTGTAGAACATGGCCCAGATGCAGTAATGACTGTGCCAGAAACTCCTGACGCATCTGGGGTTCCTTCTGCTGTCCGTTATAACGAAGACGACGACCAGTTTGAAGGATATTACAACGAAGGCGGCTGGTTGCCGCTTGGTGGCGGTAACGGTGGGCGCTGGGAACTCCTTCCGCATGCCCCTTCATCCTTATTACAGATTGGTCGTGCATATCTGGTGGATAACATCGACGGTGCCTCTACGGTGGTTTTCCCTTCCCCTAAACGGGTTGGTGATAGCATCACTGTGTGTGACCTTTTTGGTAAATTCTCAACTTATCCTCTGACTGTCGACGGTAACGGTAAATCGATCTATGGCTCTGCGGATAGCATGACGATTTCTACCGATAATGTCAGTGCGACTTTCACATGGACTGGTGAAGCCCGTGGCTGGGTTATTACATCAGGCGTCGGTCTGGGGCAAGGCCGGGTTTACAGCCGCGAAATTTACAGCCAAATTCTGTCAGCGACAACACCATCTATTACTCTGAGCACTCAACCATCTATTGTAGATGTGTATGTTGACGGAAAACGTTTGAAAGAATCCCTGTATACTCTCGACGGGTATGAAGTCAAATTTGATCCGGCGTTGGCCTCTGGTTCTGATGTGCAGATTATTCAGTACATCCCAATTCAGCTCGGCGCGGGCGGTGGGGGTTCTGGTGGCACTGTAATCACCTGGGAATACAACGGCGGTTCAGCTATCGGCGGCGAAACCCAAATCGTGTTGGATGTGGTCGTGGACTCAGTATCTGAGATCTACATCCGTGGTTCCCGTCAACAGATAGGACGTGGGTTCACATTTGATCCTGCTACCAGTACGATTACTCTGGCGGATGAACTGGAAGCTGGGGACGACGTCGTCGTTGTTATTAATGGGGACCCCACCGTTTACAACCAAATCGATCGTTCTCCGCAAGAAGTGGCGCGGGCCAACAACGTCAAGAACTCTGAAGTCATCCTCAGCACTGAGACGAATACAGTTTTAGACGGTAAGAACATTGTTTATGACGTGGTGGCCCAAACAAGTTGGAGAATTCCAACAGGGATACCGGCTGGTGCGAAAATAAATCGTGTTATCGGGAATATTTTAGTGTATACGCCAGGCAACGTTAGCGTAAATCTCATAGAAATTCCTTCGGCTTATTCTCTAAAATCTCAATTAGGTTCTGATTACGGGTCATTTTTGCTCAATGCCAAAAGAAAACCTTTGGGTGAAGCTGTACTTGCAGTATCTACTGCAGGTCTGTTGTACAGTTCCTCCTGGGTTAGTATTATGGAATATGCTCATCTGGTTACTAATCGTCCAGATCCAAACGATCAGACCACTTGGGTTTGGGATCCCGCGATACATGCATATTTAGACGATACAGGGATTTTGATTAATCAAACACCTGTTAACTCCAATATGAAAGCTAAATTCCCGTTGGTGTTCCCGCCGGGTGTGTTCAAAATCGAAAATAGCTATTTGTTGGAACGGATAGCAGGCAGCACAGGGAGCCTTGCTACTATCTTTATGTTCATCGGTTCAGGGATGACATCGACTATCATTCAACCGATGACAGAAGGGCAGATAGCATTCACTGTACAAGATTGTAAAATCAATTTTAGAGACATTGGTTTCCGTTCTGGGGCTGATTACCAGACATGTTTGGTCTTGGGAAATAAAACTTTGTGGAAACCAGTTTTCCATTGTAATATGACTCGAGTGGGAGCGTCTGGATTTGGTAAGGGTCTGGTGATTTACCTCGCATTCGATTCTACCTTTGAGGATATATTTGTACAGAATATATCTAAAATGGATGTTACTGGTACTCAAGTTTCCTATGGTATAACCATAGAAAAATATGAGGGTCCTGCTAATGGCGGGACTGCTGGTGACGGAACCGGTGATGATTCTAACCAATTGGTGTTTATTCGCCCTACTGTTGAAACTGCGAAAGCAGACAATTCTATACTTTTCAACGTAGCAGGCCGTTCAACTTCATTACCACACCATGCTATTAATTTGTTTGGCGGCCATTTCGAAACGCATAACTTAAAAGCTAAGTTGCTGAATCTTGCATTTGGCTATAATGTCAACATGTTCGGCACAGTTTTTTCACAAAACGGGCCTACTATCGATTCTGACAATAACCCGATAACAACGGTTTACCGGGGTGTTTACATCGAGAACTCTCAGAACGTCAATATGTTTGGTTGCCGGATTGGCACTACCAACAGACTGGCTTCTGTTGGCGTTTCTGATACCAAGTTTATCAAAATCACGGGTACTTCACAGAACGTGAATTTGATAAACACCCATTTGATCGGGCCTTATAATGACATATCTTCTGAGCGCCATAATATTGACAACATTATAGATTATTCGGAAGCAACAAAAGGGATAAAATCATTTACGGTACAGGGCGTCACCGCCGGGGATTATACCAGCCGCCCGATAACCAAAGACATAAGAATCAGCAGTCTAGACGGGAAGAAAGAATATTCTTTCTATACTGATAATTCCGGGGTTTTGCATTTATCGTATTCTACCAATATAGCGGATTCAAGTACGCCTACAGATTTGATGACGATGGATACAAGTGGTAATATCCTGACGGCAGCGGACTTGACTCTAGGGGCATTGGCAGGGACTGCAGCTACAAGGCGACTGTCAGGTAATGGCGGCTATATCGCCTTTGATACAATTGGTCGTGTGTATTTCAACGCTGTAAGCAACTCCCAACAATGGGTGATGGGTTCGGCAGCATTTAACCCGACGACCGATAACGCATTCACTTTGGGGCAATCAGGGTTTAGGATATCTGCCAGTTTTGTCGTGAAGCGCCAATATACTGCGACAGTATATGATTCCGCTGGTAATGGTAGCCCAGAAGGGGTTGTAACTGCTGGTGTTGGGTCGACTTATCGTCGGTTGGACGGAACGGCAGGTACTTGTTTCTATGTGAAAGAATCTGGAACCGGTAATACCGGTTGGGTGGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
783f26138ebc25de80a0bfadd505e01fc134ecfb2d7b2b9bef3ab5ee84498afb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
High activity and specificity of bacteriophage cocktails against carbapenem-resistant Klebsiella pneumoniae belonging to high-risk clones CG258 and ST307 Jimenez Quiceno,J., Salazar Ospina,L. and Tellez Carrasquilla,S. 2018-04 — GenBank