Protein
View in Explore- Genbank accession
- AEZ65102.1 [GenBank]
- Protein name
- tail tubular protein B
- RBP type
-
TSP
- Protein sequence
-
MARVEGSYESVVRGVSQQVPHQRFSGQHTDQKNLLSDPVEGLVRRRGTRRISEHLVTPSLTASAIAEIQKYRTHKWNPGSAGEPLQVAYKAKPGVIGDGRLLYIINQVTRNRVNTAGIDAETDTVYQKALANGLSAITSVGRYLFMAVNNHVGSVAASQDYLATTNRNKVVAWVRGGAYARTYTVTLLLDAGGQLKFSYTTMSSSYPTVINTAAAGNTTDTDYQNKLSKIVADYNSATTKWISDAAKDIDAENIANRLLNGPATSGNTGTGTGLIAANAAATGINKVTNLTYALVSSTLYIQGDNIREIVVDDGGDTTLIRGVGNEVTSADLVSTRHFYDKIVKVRAKKSDDSDAYYLKAESKNDSNDPGVTDRGEVVWKECAGYTQTLTNHFLFGYYHTDGVVYVSSSLSKLSTTLSITTPVLQPNLAGDDFTNPPPNFGTKQITYLGMFQDRLVVGSGAVASFSRPGDYLNFFRQSVLTLTDTDPIDMFALGAEDDVLRHSALFDKSLFIFGDKRQYVVNGRTVLTPTNQNMTVVSQFPNTTGAQPQGSGNFIFYTKPGDTSSPVITLNQMQYGQIADSTESYDLSQQLTDFCAGVCAEIVPVTSPAAVLVRPETSQNLYVFRYTDEVGTGRRMQAAWDRWEFDPAFGTIISMATYGDEILAMVMRRAEDGSTYLCVEQLSLRPAKSNEPYFDSYQVATGVGSGITVSSPYLLASPNLLNRCYVAVVGGSHALTGTTYEDRAELTASQIADGTLAAGIPFESSCIPTNPYQRDQNGNAILQGRLVLSQVQISMQDTGAMDVYVADANREWLSKHFNGFRLSRTASMVGSQPVVDTSITALIGREVRECRYRIQSVKFLPMVVTAISWQGQSFRR
- Physico‐chemical
properties -
protein length: 876 AA molecular weight: 95332,66730 Da isoelectric point: 6,07043 aromaticity: 0,08790 hydropathy: -0,23094
Domains
Domains [InterPro]
IPR058003
TTP
1–70
TTP
1–70
DC_0058
STR
1–876
STR
1–876
1
876
Architecture
STR 1-876
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
876
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 205 | 205 | 0,7725 |
| Central domain | 206 | 419 | 215 | 0,3493 |
| C-terminal | 420 | 876 | 456 | 0,2584 |
Note: Constraints were applied during segmentation.
Fixed 12 C-terminal predictions appearing before Central domain
Fixed 12 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-205
1-205
Central
206-419
206-419
C-terminal
420-876
420-876
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage phiKT [NCBI] |
1141519 | Uroviricota > Caudoviricetes > Autographivirales > Ermolevavirus > Ermolevavirus PhiKT |
| Host |
Escherichia sp. [NCBI] |
1884818 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AEZ65102.1
[NCBI]
Genbank nucleotide accession
JN882298
[NCBI]
CDS location
range 21090 -> 23720
strand +
strand +
CDS
ATGGCGCGTGTTGAAGGTTCTTACGAATCAGTAGTTCGGGGCGTCTCTCAGCAGGTGCCACACCAACGTTTCTCCGGTCAGCACACTGACCAAAAAAACTTACTTAGTGACCCGGTAGAGGGTCTGGTACGGCGTAGAGGTACTCGTCGCATATCAGAGCATCTTGTTACCCCGTCACTGACTGCCTCCGCTATTGCAGAGATTCAAAAATATCGTACACACAAGTGGAACCCCGGTTCCGCTGGCGAACCACTACAGGTTGCATATAAGGCCAAGCCCGGTGTTATAGGGGATGGCCGTCTGCTGTACATCATCAATCAGGTTACTCGGAACCGGGTTAACACTGCTGGTATAGATGCCGAGACTGATACGGTGTATCAGAAAGCACTCGCTAATGGTCTGTCCGCCATAACCTCTGTGGGTCGTTACCTGTTCATGGCGGTAAACAATCATGTGGGCAGCGTGGCTGCGTCTCAGGATTACTTAGCAACAACCAACCGCAATAAGGTTGTAGCATGGGTCCGTGGTGGGGCATATGCCCGTACATATACTGTGACCTTATTGCTGGATGCTGGTGGTCAGTTGAAGTTCAGCTATACCACAATGTCCTCGTCGTACCCGACAGTGATTAACACCGCTGCGGCTGGTAATACCACCGACACGGATTATCAGAATAAGCTGTCCAAGATAGTCGCCGATTACAACTCGGCCACTACCAAGTGGATTTCGGACGCAGCCAAGGACATCGACGCGGAGAATATTGCCAACCGCTTATTGAACGGTCCAGCCACATCCGGTAATACTGGTACTGGTACTGGTCTTATTGCAGCCAACGCTGCTGCCACGGGAATCAATAAAGTAACCAACCTGACGTATGCGCTGGTTAGCTCCACGCTGTATATTCAGGGCGACAACATTCGTGAGATAGTTGTTGACGATGGTGGCGACACGACACTGATTCGTGGCGTTGGTAACGAGGTAACTAGCGCAGACTTGGTATCCACCCGACACTTCTATGACAAGATTGTGAAGGTGCGTGCTAAGAAGTCCGACGACTCTGACGCATACTACCTGAAGGCAGAATCAAAGAACGACTCCAATGACCCCGGTGTAACTGACCGTGGGGAAGTGGTCTGGAAAGAGTGTGCTGGATATACTCAGACGTTGACCAACCATTTCCTGTTCGGCTACTACCACACTGATGGGGTCGTGTATGTTTCAAGCTCTCTTTCTAAGCTGTCTACTACGCTTTCAATCACTACCCCGGTTCTCCAACCGAACCTTGCTGGGGATGATTTCACCAACCCACCGCCTAACTTCGGCACCAAGCAAATCACCTATTTGGGTATGTTCCAAGACCGTCTTGTCGTGGGTAGCGGGGCAGTTGCTTCGTTCTCGCGGCCCGGAGATTACCTTAATTTCTTTAGACAATCGGTGCTCACGCTTACTGACACTGACCCAATCGACATGTTCGCACTCGGAGCGGAGGATGATGTTCTCCGACACTCGGCGCTGTTCGATAAGTCGTTATTCATCTTTGGCGACAAGCGACAATACGTAGTCAACGGGCGTACCGTCCTGACTCCTACCAACCAGAACATGACCGTGGTATCGCAATTCCCGAACACTACCGGGGCGCAGCCACAGGGTTCCGGCAACTTCATCTTCTATACGAAGCCCGGTGACACGAGTTCTCCAGTTATTACTCTCAACCAGATGCAGTACGGGCAGATTGCAGACTCCACGGAGTCCTACGACCTGTCTCAACAATTGACTGACTTCTGTGCTGGGGTATGTGCTGAAATCGTTCCTGTGACCTCTCCAGCGGCTGTGCTAGTTCGTCCAGAGACATCGCAGAACTTGTACGTGTTCCGATACACCGATGAGGTGGGTACTGGTCGTCGTATGCAGGCTGCGTGGGACCGCTGGGAGTTCGACCCGGCATTCGGGACAATCATCTCTATGGCGACCTACGGCGATGAGATTCTGGCTATGGTTATGCGTAGGGCCGAGGATGGTTCGACGTACCTGTGCGTTGAGCAGTTATCGTTACGACCTGCAAAAAGCAACGAACCATATTTCGACTCATATCAGGTGGCCACTGGTGTAGGTTCCGGGATTACCGTATCCTCTCCGTACCTGTTAGCAAGTCCGAACTTACTTAATCGCTGTTATGTTGCGGTTGTTGGTGGTAGCCATGCTTTGACCGGGACCACGTATGAGGATCGTGCAGAACTGACAGCCTCTCAAATTGCCGATGGGACTTTGGCGGCAGGTATCCCGTTCGAATCTTCCTGCATCCCAACCAACCCTTATCAACGTGACCAGAATGGGAACGCTATTCTACAGGGTAGGCTGGTGCTGTCTCAGGTTCAAATATCCATGCAGGATACTGGGGCTATGGACGTATACGTGGCTGACGCTAACCGTGAGTGGTTATCGAAACACTTCAACGGGTTCCGCCTGTCCCGTACCGCATCTATGGTTGGTAGTCAACCTGTCGTGGACACCTCTATAACAGCATTGATTGGCCGAGAGGTCCGTGAATGCCGTTATCGCATTCAATCCGTTAAATTCCTGCCCATGGTGGTAACAGCCATCTCGTGGCAGGGTCAATCATTTAGGAGATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
c3b71409ea46aeecd08bef507540a9b5c74f0db88a7f7fdbdc4b91938a08eba6
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50