Protein

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Genbank accession
XHY52912.1 [GenBank]
Protein name
tail fiber/tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQEIKTVIQYPTGATEFDIPFDYLSRKFVRVSLVSDDNRRLLNNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERVVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPQDDAGNLDARNRRIVRLAQGVDGTDAVNKNQLDETLGEAGGILSSIKDTQKEVVDFIEEFANDTGVVRGVRVVYNNGSANGGETSFVINKEGPVLAVPLLEINGSTQTEGWHYDYTPSTKTVRLVKPLEAGDFVVAQVASSVTDVETALRGPNGASMIGMPQGGSLKQAVTWRSILSFGAVGDGSTDDTAAFQAAWEAPDVYIMIPTGYRFVVTAPVGSLTVGKAKRWCGERGSVIITKGLGGFHQTGLGWGFEGIRFVPLAVAPMATVPFAIKSGTVDNNRYSSIVSCEFRGYTSGQRYDVAVDLYNVWYSKIENLYINQSGEGDFSKQSFGGIGLRMSYCVNNNITNCQIGSCTTGMLVTANTRPVPAGGTTHCCEGLIIHANTMIANKCNLDVREGYSIKVTNNVIDIPLSSTVNPVYFAAMSSQLTDNWISTATGTIYIGRGESGLQAYDGSTNVISRNTIRSSSSATHANIRVGAGVGLLNIIGNTITFGGTGISADGRSSGWYMSDNIFAAQSIQAYDVHLVTNMRVGTNKVYSAGKPTKSVHSSTVLTPTTFSAFATADLVDGAMGENKITGPQQFNIAVPEGYFVGAPEFAIANLASGRILGVARYLRSESSATSLRFSFVSIGGPIVAGNYAFSVMASDLASSF
Physico‐chemical
properties
protein length:771 AA
molecular weight: 82473,73200 Da
isoelectric point:5,77594
aromaticity:0,08560
hydropathy:-0,04682

Domains

Domains [InterPro]
DC_0778
STR
1–747
DC_0778
IPR005604
ATT
2–127
IPR005604 IPR011050
IPR012334
STR
292–678
IPR012334
XHY52912.1
1 771
Architecture
ATT
STR
ATT 1-127 | STR 128-747 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHY52912.1
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 305 305 0,9955
Central domain 306 661 357 0,9927
C-terminal 662 771 109 0,9712
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-305
Central
306-661
C-terminal
662-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Poteet
[NCBI] 		3348361 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY52912.1 [NCBI]
Genbank nucleotide accession
PQ299796.1 [NCBI]
CDS location
range 33566 -> 35881
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTATCCTACAGGGGCAACTGAGTTTGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGCGTATCGCTGGTGTCTGACGACAACCGCAGACTGTTGAATAACATCACCGAGTATCGATATGTGTCTAAGACCAGAGTCAAACTGCTGGTAGCAACCACAGGTTTCGACCGTGTGGAGATTCGTCGGTTCACGTCGGCGTCAGAGCGAGTGGTGGACTTCAGCGACGGTTCTGTATTACGCGCCAACGACCTTAACGTCTCACAGCTACAGTCTGCACACATCGCTGAAGAAGCGCGCGATGCCGCACTGCTGGCAATGCCTCAGGATGATGCTGGGAACCTTGACGCTCGCAATCGGAGAATCGTCCGGTTAGCTCAGGGTGTCGATGGAACAGATGCGGTTAACAAGAACCAGCTGGATGAAACTCTAGGGGAGGCTGGCGGTATCCTCAGCTCTATCAAAGATACCCAGAAGGAAGTTGTGGACTTCATTGAGGAGTTCGCAAACGACACTGGTGTGGTGCGGGGTGTTCGCGTTGTGTACAACAACGGTTCAGCCAACGGTGGTGAGACATCCTTCGTCATCAATAAGGAGGGACCTGTACTGGCAGTGCCGCTGCTGGAAATCAACGGGTCGACTCAGACAGAGGGTTGGCATTACGACTATACCCCAAGCACTAAAACTGTGCGGTTGGTAAAGCCGCTAGAGGCCGGTGATTTCGTGGTTGCCCAAGTTGCTTCCAGCGTAACAGACGTTGAGACTGCCCTGCGCGGACCTAACGGTGCATCCATGATTGGCATGCCCCAAGGCGGCTCATTGAAACAGGCAGTGACTTGGCGAAGCATCTTGTCGTTTGGTGCTGTTGGTGATGGCTCAACTGATGATACGGCTGCCTTCCAAGCGGCGTGGGAAGCTCCAGATGTGTACATCATGATTCCTACTGGCTACCGCTTCGTGGTTACCGCCCCAGTCGGCTCATTGACTGTAGGCAAAGCCAAGCGGTGGTGCGGTGAGCGCGGCTCAGTCATCATTACAAAGGGCTTAGGTGGTTTCCACCAGACTGGCCTTGGGTGGGGCTTCGAGGGAATCCGCTTTGTCCCGCTGGCAGTGGCCCCCATGGCCACAGTGCCGTTTGCCATTAAGTCAGGAACCGTGGACAACAATAGATACTCATCAATCGTAAGCTGTGAGTTCCGTGGGTATACCTCGGGGCAGCGTTACGATGTGGCGGTTGACCTGTATAACGTGTGGTACTCCAAAATCGAGAACCTGTACATCAACCAGTCTGGTGAGGGCGACTTCTCTAAGCAATCCTTTGGTGGCATAGGCCTCCGTATGAGTTACTGTGTCAACAATAATATCACAAACTGTCAAATCGGTAGCTGCACAACGGGTATGCTCGTCACGGCTAACACTCGACCAGTTCCTGCCGGTGGGACAACGCACTGTTGCGAGGGGCTGATTATCCATGCCAACACCATGATTGCCAACAAGTGCAACTTAGACGTCCGTGAGGGTTACTCCATCAAGGTGACCAACAACGTGATTGACATCCCGCTCTCATCAACGGTTAACCCGGTGTACTTCGCGGCCATGTCCTCACAGCTCACCGATAACTGGATATCTACCGCCACAGGCACAATCTACATCGGTCGAGGCGAGAGTGGCTTGCAGGCTTATGACGGCAGTACGAACGTAATCTCTCGTAACACCATCCGTAGCTCAAGCTCAGCGACTCACGCCAATATCCGTGTGGGGGCTGGTGTGGGCCTGCTGAATATTATCGGTAACACTATCACATTCGGTGGCACCGGAATCTCAGCTGACGGCAGGTCGTCTGGTTGGTACATGTCTGATAACATCTTTGCGGCGCAGAGCATTCAGGCCTATGATGTACATTTGGTCACAAACATGCGTGTTGGCACCAACAAGGTGTATTCGGCGGGCAAACCAACCAAGTCCGTTCACTCCAGCACCGTGCTGACCCCCACCACCTTCAGTGCGTTTGCTACGGCTGACCTCGTGGATGGCGCAATGGGCGAGAACAAGATTACAGGACCGCAACAGTTCAACATCGCCGTTCCTGAGGGTTACTTTGTGGGGGCACCTGAGTTCGCCATCGCTAATCTGGCCAGCGGAAGAATCTTAGGCGTTGCCCGGTACCTACGAAGCGAGTCTAGCGCTACATCCCTGCGATTCTCATTCGTGAGCATCGGCGGTCCGATTGTCGCTGGTAACTATGCGTTCAGTGTAATGGCCTCAGACCTCGCCTCATCTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
091d5cf9d9323fe495c03a4e4f3a67daf741e63a636c1c114e6e3e21a25593e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Poteet Mora,D.A., Lessor,L. and Gill,J.J. 2021-01-28 — GenBank