Protein

View in Explore
Genbank accession
XZP49839.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MVDANNPSGGKDGIITFENLNGDWGKGNYVIGGRTCYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGISPFLSTRYICSR
Physico‐chemical
properties
protein length:132 AA
molecular weight: 14297,44250 Da
isoelectric point:4,78933
aromaticity:0,12121
hydropathy:-0,54697

Domains

Domains [InterPro]
IPR015331
RBD
1–122
IPR015331
IPR011050
STR
1–122
IPR011050
IPR012332
STR
1–124
IPR012332
XZP49839.1
1 132
Architecture
STR
STR 1-124 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GF04
[NCBI] 		3458938 Viruses >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZP49839.1 [NCBI]
Genbank nucleotide accession
PX241559.1 [NCBI]
CDS location
range 4506 -> 4904
strand +
CDS
ATGGTAGACGCCAATAATCCAAGCGGAGGTAAAGATGGCATTATAACCTTCGAAAACCTTAACGGCGATTGGGGTAAGGGTAACTATGTCATTGGTGGTCGAACCTGCTACGGGTCAGTAAGTAGCGCCCAGTTTTTACGTAATAACGGCGGCTTTGAACGCGACGGCGGGGTTATTGGGTTTACCTCATACCGTGCAGGGGAAAGCGGTGTTAAGACGTGGCAAGGCACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCTGCGGTACTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCAGAAGATGACCGCCCGGGGATTTCCCCATTTCTCAGTACCCGGTACATATGCTCCCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c253f6e441b9de11a99bdd09b5c1eb9335cb654168acc4d6b80ceb5a4b6f01b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50