Protein

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Genbank accession
YP_010670309.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MANQNFKVKNGLEVGTGVTISAGIVTASTFSGNATSATYAITAGVSTYSGVSGFSTFSGYSNASGVSTFSGYSNASGVSTFSGYSNASGVSTFSGYSDTTGFSTFSGYANASGVSTFSGYSDTTGFSTFSGYSNASGVSTYSGVSGFSTFSGYSNTTGFSTFSGYSDTTGFSTFSGYSNLSGISTYASNAGIATTTTNIPNLTGDITSNGTATSIASGVIVDDDINASAAIAVSKLAASTISGVTLGNNLSTLTLNTSGTGLSGSTTYNGSGSATFTVASNATSSNTNSTIVARDASGNFSAGTITATTFSGSGASLTSLNASNLSSGTVPTATLASGTANSTTYLRGDQTWASISGGATLSNDTTTNATYYPTFSSTTSGTYSTAYVSNTKCTFNPSTGTLSATVFTSLSDRTQKTDITPITDAIKTVKQLQGVKYKWIDNHNKESIGVIAQDIEKVLPEVVNQNPDGLKSVSYGNIVGLLIEAIKEQQVRIEELERKLNA
Physico‐chemical
properties
protein length:502 AA
molecular weight: 50727,14180 Da
isoelectric point:4,81929
aromaticity:0,09562
hydropathy:-0,07131

Domains

Domains [InterPro]
DC_1875
STR
225–351
DC_1875 IPR036388
DC_1985
RBD
315–502
DC_1985
IPR030392
CHP
411–500
IPR030392
IPR030392
CHP
411–463
IPR030392 Coil
YP_010670309.1
1 502
Architecture
STR
RBD
STR 225-351 | RBD 352-502
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670309.1 [NCBI]
Genbank nucleotide accession
NC_070963 [NCBI]
CDS location
range 220827 -> 222335
strand +
CDS
GTGGCAAATCAAAATTTCAAAGTCAAAAACGGACTTGAAGTAGGAACTGGTGTAACTATAAGTGCTGGTATTGTAACTGCTTCTACTTTTAGTGGAAATGCTACCAGTGCAACTTACGCTATAACAGCAGGAGTATCAACATATTCTGGAGTATCTGGATTCTCTACGTTCTCTGGATATTCTAATGCTTCTGGAGTATCTACTTTCTCTGGATACTCCAATGCTTCTGGAGTCTCAACGTTCTCTGGATATTCTAATGCTTCTGGAGTATCTACTTTCTCTGGATACTCTGATACCACTGGATTCTCTACATTCTCCGGATATGCAAATGCTTCTGGAGTCTCAACGTTCTCTGGATATTCTGATACTACAGGTTTCTCAACGTTCTCTGGATATTCTAATGCTTCTGGAGTATCAACTTATTCTGGAGTATCTGGATTCTCTACGTTCTCTGGATACTCTAATACCACTGGATTCTCTACGTTCTCTGGATACTCTGATACTACTGGATTTTCTACGTTTTCTGGATACTCTAATCTTTCAGGAATATCGACTTATGCTTCTAATGCTGGAATTGCAACTACAACAACAAATATACCAAACTTAACTGGTGATATTACTTCTAACGGAACAGCAACTTCAATTGCTTCTGGAGTTATTGTCGATGATGATATTAATGCTTCTGCCGCTATAGCAGTATCTAAACTAGCAGCATCAACAATTTCTGGAGTTACTTTAGGAAATAATTTAAGCACTCTTACTTTAAATACATCAGGAACTGGTTTATCAGGTTCCACGACTTATAATGGATCGGGTTCTGCAACATTTACTGTTGCATCAAACGCTACAAGTTCTAACACTAATTCCACAATTGTTGCAAGGGATGCTTCCGGAAACTTTAGTGCTGGAACTATAACTGCAACGACCTTTAGTGGTTCTGGTGCATCTTTAACTTCATTAAATGCTTCTAATCTTTCTTCAGGAACAGTTCCAACAGCAACACTTGCATCCGGAACTGCAAACTCGACAACGTATCTAAGAGGAGATCAAACTTGGGCATCCATTAGTGGTGGTGCTACATTATCAAATGACACCACAACAAACGCAACTTACTATCCAACATTTAGTTCAACAACTTCGGGGACATATTCAACTGCATATGTTTCAAATACTAAATGCACTTTTAACCCATCAACAGGAACTTTATCAGCAACGGTATTCACGTCACTTTCTGATAGAACACAAAAAACTGATATAACTCCAATTACAGATGCGATTAAAACTGTAAAACAACTTCAAGGTGTTAAGTATAAGTGGATAGATAATCATAATAAAGAATCAATCGGTGTGATTGCTCAAGACATTGAAAAGGTATTACCGGAAGTTGTAAATCAAAATCCAGATGGACTTAAGTCAGTGTCTTATGGAAACATTGTTGGATTATTAATTGAAGCAATTAAAGAACAACAAGTTCGTATTGAAGAATTGGAGAGAAAATTAAATGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec94681f39859ec5595e5614c1340a22d5cc43fbb3902a6d89a0716004dd005c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50