Protein

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Genbank accession
YP_012787121.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MKKILDSAREYLRTNNKIKTACLITLELPSSTGSSSAYIYLTDYFRDVIYNGILYISGKVKSITTHKQNRKLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRSISIHQAVIDEEGNILPVDPDTKGPLLYFRGKITGGGIKDNIGTSGVSTSVITWNCSNQFYDFDRVNGRFTDDADHRGLEIVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFLPVVYGVQKIPGIPVFADTELHNPNIVYVVYAFCEGEIDGFLDFYFGDVPMICIDPNDSKSRTCFGTKKVAGDTMQRIASGQPSSEPSVHGQEYKYNDGNGDIRIWTYHGKADQSAADVLVNIAKEKGFYLQNMNENGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEVSAEVQGKKIKIYHSDGRVTADKTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAIMDIIDESYQVSWQPYWRYVGWTDAVGENRQIVQMNTILDTSESVFKNVQGLIESYGGAINNLSGQYRITVEKFSNTPLEIDFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSIFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLTFSLPYHFIGIEPNDPVAFTYGRYGWDKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFMYTPTPGGQVGSIGKNGELSWLPSLTNNVVYYSIVHSGHANPYIVQQLETNPNLRMIQEIIGEPAGLAVFEIRAVDINGRRSSPVTLSVELNSAKNLSVVSNFRVTNTASGDASEFVGPDVKLAWDRIPEEDIIDGIFYTLEIYDNLDRLLRSVRIEDQYVYDYLLIYNKADYALHNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107217,79180 Da
isoelectric point:5,08563
aromaticity:0,11275
hydropathy:-0,40021

Domains

Domains [InterPro]
DC_0187
STR
230–948
DC_0187
IPR032876
ATT
594–686
IPR032876
YP_012787121.1
1 949
Architecture
STR
ATT
STR
STR 230-593 | ATT 594-686 | STR 687-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012787121.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9466
Central domain 313 525 214 0,3170
C-terminal 526 949 423 0,0042
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-525
C-terminal
526-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_UTK0009
[NCBI] 		3028908 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus UTK0009
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012787121.1 [NCBI]
Genbank nucleotide accession
NC_111487.1 [NCBI]
CDS location
range 92256 -> 95105
strand -
CDS
ATGAAGAAAATTCTTGACAGTGCAAGAGAGTATCTAAGAACCAATAATAAAATAAAAACTGCATGCCTTATTACTCTTGAATTGCCAAGCTCTACCGGATCAAGTTCTGCGTACATTTATCTTACAGACTATTTTAGGGATGTAATTTATAATGGTATTCTTTACATATCCGGTAAAGTTAAGTCTATAACAACACATAAACAAAATAGAAAACTTTCCATTGGTAGCCTTTCTTTTACTATCACAGGTACTGCTGAGGATGAAGTATTAAAACTAGTCCAAAATGGTGTATCCTTCCTAGATAGGTCTATTTCAATCCATCAAGCGGTTATTGATGAAGAAGGTAACATTCTTCCTGTAGATCCAGACACTAAGGGTCCTTTACTTTACTTCCGTGGTAAAATTACTGGTGGGGGTATTAAGGATAACATTGGTACTTCTGGAGTTAGTACATCCGTTATTACATGGAACTGTTCAAACCAATTCTATGACTTTGATAGAGTAAATGGACGTTTCACAGATGATGCTGACCATAGAGGGCTTGAGATTGTTGCCGGCCAATTAGTTCCGTCTAATGGTGCTAAGCGACCTGAATATCAAGAAGACTACGGGTTCTTCCACGCTAACAAGAGTATCTCTATTCTTGCTAAGTATCAGGTTCAGGAAGAACGTTATAAGTTACAATCTAAGAAAAAATTATTTGGTCTTTCTAGAAGCTATAGTCTAAAGAAATACTATGAGACTGTAACTAAGGAAGTAGATCTTGATTTTAACTTAGCTGCTAAATTCCTGCCAGTAGTATATGGAGTTCAGAAAATTCCTGGAATCCCAGTATTTGCAGATACTGAACTGCATAATCCTAATATCGTATATGTAGTATACGCTTTCTGTGAGGGTGAGATTGATGGGTTCCTAGATTTTTACTTTGGTGATGTACCAATGATCTGTATTGATCCTAATGATAGTAAGTCTCGTACTTGCTTTGGTACTAAGAAAGTAGCTGGTGATACCATGCAACGTATTGCTTCTGGTCAACCAAGCTCTGAACCTTCTGTTCATGGACAGGAATATAAGTATAATGATGGTAATGGCGATATCCGTATCTGGACTTATCATGGTAAGGCTGATCAATCTGCTGCTGATGTTCTAGTTAACATTGCAAAAGAGAAAGGTTTCTATTTACAGAACATGAACGAGAATGGGCCGGAATACTGGGACTCTCGTTATAAACTGTTAGATACTGCTTATGCTATCGTTCGCTTTACTATTAATGAAAACAGAACAGAAATTCCAGAAGTTAGTGCAGAAGTTCAAGGTAAGAAGATTAAGATCTATCATTCAGATGGTAGAGTAACCGCTGATAAGACTAGCTTAAATGGTATCTGGCAAACTCTGGACTACCTAACCTCTGATCGCTATGGTGCTAATATCACTATCGATCAGTTCCCTCTCCAGCAACTTATTCAAGAAGCCGCTATTATGGATATCATTGATGAATCCTATCAGGTTTCTTGGCAACCCTATTGGAGATACGTTGGATGGACTGATGCTGTAGGAGAGAATAGACAAATAGTTCAAATGAACACTATTCTCGATACCTCTGAGTCAGTATTTAAAAACGTGCAGGGATTAATAGAGTCTTATGGTGGTGCTATCAACAACTTATCGGGACAGTATAGGATAACTGTTGAGAAGTTCTCAAATACTCCACTAGAGATTGACTTCTTAGATACCTACGGTGATTTGGAGCTATCAGATACCACAGGTAGAAATAAGTTCAACTCAGTACAAGCCTCTATACTAGATCCTGCATTAAGCTGGAAAACTAACTCCATTACATTCTTTAACTCTATATTTAAAGAACAAGATAAAGGATTAGATAAAAAACTTCAGCTTTCTTTTGCAAACATCACTAACTATTATACTGCACGTAGCTTTGCAGATAGAGAACTGAAAAAATCTCGTTACTCACGAACTCTCACATTCTCATTACCATATCATTTCATAGGTATTGAGCCTAACGATCCGGTTGCTTTTACATATGGTCGTTATGGTTGGGATAAGAAATACTTCCTAGTTGATGAAGTTGAAAACTCTAGAGAAGGTAAGATTAATATTACACTGCAAGAGTATGGTGAGGATGTGTTCATTAACTCCGAGCAGGTTGATAATAGCGGTAACGATATTCCTGATGTTAGTAATAACGTACTGCCTCCTAGAGACTTTATGTACACACCAACACCGGGTGGACAAGTAGGATCTATTGGTAAGAATGGTGAGCTATCTTGGCTTCCTAGCTTAACTAATAACGTTGTTTATTACTCCATCGTTCACTCTGGACATGCTAATCCTTATATCGTACAGCAATTAGAAACTAATCCAAATCTACGAATGATCCAAGAAATTATTGGAGAACCTGCTGGTTTAGCAGTCTTTGAGATTAGAGCTGTAGATATTAATGGTAGACGAAGTTCTCCTGTAACATTATCGGTAGAACTTAACTCTGCTAAAAACTTAAGCGTCGTTAGTAACTTTAGGGTTACTAATACAGCTTCAGGAGATGCATCGGAGTTTGTAGGACCAGACGTTAAGTTGGCCTGGGATAGAATTCCAGAAGAAGATATCATTGATGGAATCTTCTACACTCTCGAAATCTACGATAACCTAGATCGTTTATTAAGAAGTGTACGAATTGAAGATCAGTATGTCTACGATTATCTACTGATATACAATAAGGCAGACTATGCTCTTCATAACGAGGATGCTCTAGGTATTAATAGGAAGTTACGCTTCCGTATAAGAGCAGAAGGTGATAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1ee1ab352c88bb01c202e204089a8d3d66601fd40c6d2676a16b15c27bd692a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank