Protein

View in Explore
Genbank accession
CAL9985179.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MCTGILYTDIFIEALNNRILVINNEGYNMAVVNIDEATRRLNTSADKLDVANKFLTDVVSGAENATIPNPNGSEASPSLEGMVKKHTTSILESDPKILQDSNAGYLQDQVTGLKTYPADTKQTASVAAPNNNCPAGTTALRDATGGVIYRTSKAVSGVITDIDFSAKTATVGGVSVRLSINVSVYHSASVADMIAGTTINGSVDLYAGQLWMVNNQAYRCDKAAPAGISDFSEVSAKERQQSLMGILYGKIQKDDATQTITIACRGDSLTYGEDTTVDPRPANQTPTPSGRVHNKTRASTPYPDALQTYLQPLFSNVVSVINQGYSGDNTKTGYGDWGVDVNSDLTIIMYGTNDAAHGFSPYQSVEDYIKYYRLIILRELFERNAPVMLITPPPQKQVLSNNRLLDGYRMAVYQLGLEFGAPVIDGIEVFKNVDSTLFSDNVHFRAIGYQWLASAVQARILSKPANFTSVSGGSNMTVRFPEDGVIAKWTNWNVQTAKASQVTPPLTSFSGGYVVETSSYFEKICFSFYCEQDDIIAMPNIEIENATVSVQLNNGIWQPQYTFDDRVQSTGDLRAKPDALYEYSALNRTAFINRNAAYEVSKSNRLHIATRGWKTLTLYIKSNGSTGSSRLTVGGVNFESYETVEMWDRHFYGVFGQQKPLGNVTPRYVGQFYTDTTPATASNPTTQVVWLATGLTSANWKVISNIDISQSLLPTGNVTPYALGQMYLDTTSGQFKWYKASGLAASNWVQISNN
Physico‐chemical
properties
protein length:754 AA
molecular weight: 82396,24750 Da
isoelectric point:5,39916
aromaticity:0,09682
hydropathy:-0,25080

Domains

Domains [InterPro]
DC_2319
STR
30–205
DC_2319 IPR036514 DC_0867
IPR036514
STR
255–460
IPR036514 DC_0735
SSF52266
STR
260–461
SSF52266
IPR045136
Unmapped
266–488
IPR045136
IPR013830
ENZ
266–450
IPR013830
CAL9985179.1
1 754
Architecture
STR
STR
RBD
STR 30-205 | STR 249-461 | RBD 462-753 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9985179.1
1 754
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9922
Central domain 242 444 204 0,4965
C-terminal 445 754 309 0,5787
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-444
C-terminal
445-754

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D504
[NCBI] 		3105268 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9985179.1 [NCBI]
Genbank nucleotide accession
OZ195880.1 [NCBI]
CDS location
range 87206 -> 89470
strand +
CDS
ATGTGTACGGGGATATTATACACGGACATATTTATTGAAGCCCTAAATAATCGCATATTGGTAATAAACAATGAAGGATATAACATGGCTGTAGTCAACATAGATGAAGCAACAAGACGCCTCAATACCAGCGCTGATAAACTGGACGTAGCAAATAAGTTCCTAACGGATGTTGTTTCTGGGGCTGAAAATGCTACCATCCCTAACCCTAACGGCAGCGAAGCATCTCCGTCATTAGAAGGTATGGTTAAGAAACATACAACTTCCATCTTAGAATCAGATCCTAAGATTCTACAGGATAGTAACGCGGGTTACCTACAAGACCAAGTTACAGGCCTGAAGACATACCCAGCGGATACTAAACAAACCGCTTCTGTAGCCGCACCAAACAACAATTGCCCAGCTGGTACTACAGCCCTACGTGATGCAACAGGCGGTGTGATCTACCGAACTTCTAAGGCTGTAAGCGGTGTGATAACCGACATCGATTTTAGCGCGAAGACTGCGACTGTTGGTGGGGTTAGTGTCAGGTTGAGTATAAATGTTTCAGTTTATCATTCCGCTAGTGTCGCGGATATGATTGCTGGTACTACGATTAATGGGAGTGTTGACCTATATGCTGGTCAATTATGGATGGTAAACAACCAGGCTTACCGATGTGACAAAGCCGCCCCAGCAGGTATTTCTGACTTCTCAGAAGTGTCCGCAAAAGAACGACAACAGAGTTTAATGGGTATTCTTTACGGTAAAATACAAAAGGATGATGCAACACAAACAATAACCATTGCTTGTCGCGGTGACTCTTTAACGTATGGTGAAGATACAACCGTAGATCCCCGACCAGCAAACCAGACACCAACACCAAGCGGAAGAGTTCACAACAAGACAAGAGCTTCAACTCCATACCCTGACGCTCTTCAAACTTATTTACAGCCTTTGTTCTCAAACGTTGTTAGCGTTATCAATCAGGGATACTCTGGAGATAACACAAAAACCGGCTATGGAGATTGGGGTGTAGATGTGAACAGCGACCTAACAATTATAATGTATGGTACAAATGACGCTGCACATGGGTTCAGCCCTTACCAGTCAGTTGAAGATTATATTAAGTATTACCGCCTCATTATACTTAGAGAGTTATTTGAAAGAAACGCCCCAGTAATGCTAATCACACCGCCGCCGCAGAAGCAAGTGCTTTCCAATAATAGATTACTGGATGGATATAGGATGGCTGTTTATCAACTCGGTTTAGAGTTTGGTGCTCCAGTTATCGACGGTATTGAGGTATTTAAAAATGTGGACTCGACACTGTTCAGTGATAACGTTCACTTTAGGGCGATCGGTTATCAATGGCTAGCAAGCGCTGTGCAAGCTAGAATCCTATCCAAACCTGCTAACTTTACCAGCGTAAGTGGCGGTTCAAACATGACCGTGAGATTCCCAGAGGATGGGGTAATAGCTAAGTGGACAAACTGGAATGTTCAGACCGCAAAGGCATCACAAGTAACTCCACCGCTAACTAGTTTCTCAGGCGGTTACGTTGTAGAAACTTCGTCGTACTTTGAGAAGATATGCTTCTCATTCTATTGCGAGCAGGATGATATTATAGCGATGCCTAACATAGAGATTGAGAACGCCACGGTCTCTGTACAGTTGAATAATGGAATTTGGCAACCTCAGTATACTTTTGATGATAGAGTTCAGAGCACAGGCGATTTGAGAGCTAAACCTGATGCGCTATATGAATATTCAGCCCTTAATAGGACGGCATTTATTAACAGGAATGCCGCATACGAGGTGTCAAAGTCAAATAGACTCCACATTGCAACTAGAGGTTGGAAGACGCTTACTTTATACATTAAAAGTAATGGGTCAACAGGATCGTCTAGACTTACAGTTGGTGGTGTTAACTTTGAGTCGTACGAAACGGTTGAGATGTGGGATAGGCATTTCTACGGTGTTTTTGGGCAACAAAAACCATTAGGGAATGTAACGCCTAGATATGTAGGTCAATTTTACACCGACACCACCCCTGCGACGGCATCTAACCCAACCACACAAGTTGTGTGGTTGGCTACAGGGTTAACTTCCGCAAACTGGAAGGTTATATCTAATATAGATATCAGCCAATCCTTATTACCGACAGGTAACGTGACACCGTATGCTCTAGGGCAGATGTACCTAGACACTACATCAGGACAATTTAAATGGTACAAGGCGAGTGGGCTTGCGGCCTCTAACTGGGTTCAAATATCAAACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09d2bcd635917f26f7aebc43a0765e8cc7e4da74711428c98cc263ad77c14720
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7179
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50