Protein

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Genbank accession
QPB07312.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGRVQAGMGRPIQGMSQQADRDRINGQCTLQENMIPSALDSLYKRIGTQHVAQLPLSADRPYDERTTIHFYDRGDEEKYFIFIEPDNATPFVFRTDGLACPVSAPQSVWDYMTNSDPLRNISFSTIGDYTFLANSAVTVRARADVQPPNPANRAIVYVQFATYRRTYTVVINGNSDGTGGQRYALTMPGSTYSNGESKANFAAERIKTDDVVKRLAHMMREGIATGDWGTNPEAADPTYGAAVYPERMNVEVYGNCMFITHPSDNIRTITTIDGANGADMIAVQNTVKSPAYLPPYAPVGWVLLIQNTEGVKKNNYWLKATGTDGSKVKWEESLEGGAKLGFDNRTMPHQLYRDQIVNGVPQFKLQAAPWDDRAVGNDTSVPFPSFLNQTVQSVGTFQNRLFFTSGESAIFTRSNDFYNFFKESSQTETDADPIDVFSDSEKVNNIRNSVTVDGDAIFFASNGQFMVEGSKPVTHANVVFKQVTSFPMNIYAKPAITGESIMFAYDAGNWSGIREMFTDSDKDTKTARPITEHVEKLIRGEVRQLSSNPNTNTLIVRTDTDAHIAYIYDWLWQGADKVQAAWHKWTFDNGSKLLHVQFVDDDVYMIFLHADGLVYLEHMPLTNDDNDEGMDFPCRLDRKITIKATWYPNLQKWGFTTPFVIRDADLPNWLAVCATGCYRADIGTEFEFARSFGNTNFTTDISLQDPAVATEVTIVLGRKFISRYIPTQPFIRDQQGLVMSIDRMTMGRMNVNYDRTGAFKVLVSDQMGRQWKYPFYGRSMGSFNNKVGFAPLISGTFPFPVRLFTHDATIEIQSDSHLPLQIRGLEWEGSYQQTGRRL
Physico‐chemical
properties
protein length:838 AA
molecular weight: 94230,65200 Da
isoelectric point:5,46174
aromaticity:0,11456
hydropathy:-0,40322

Domains

Domains [InterPro]
IPR058003
TTP
1–837
IPR058003
QPB07312.1
1 838
Architecture
TTP
TTP 1-837 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB07312.1
1 838
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9694
Central domain 141 339 200 0,3782
C-terminal 340 838 498 0,3031
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-838

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BUCT553
[NCBI] 		2776766 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Nerthusvirus
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB07312.1 [NCBI]
Genbank nucleotide accession
MT941682 [NCBI]
CDS location
range 29619 -> 32135
strand -
CDS
ATGGGCAGAGTTCAGGCGGGAATGGGGCGACCCATCCAAGGCATGAGCCAGCAGGCTGACCGCGACCGCATCAACGGGCAATGCACTCTTCAAGAGAACATGATCCCGTCTGCGCTCGACAGCCTGTACAAGCGCATCGGCACCCAGCATGTGGCACAGTTGCCACTCTCTGCTGACCGTCCGTATGACGAGCGAACCACCATCCACTTCTACGACCGAGGTGATGAGGAAAAGTATTTCATCTTCATCGAGCCAGACAATGCCACTCCATTCGTGTTCCGCACTGATGGGTTGGCTTGTCCGGTTAGCGCCCCGCAGTCGGTGTGGGACTACATGACGAACAGTGACCCTCTACGGAACATCTCGTTCAGCACCATCGGCGACTACACCTTCCTCGCAAACAGTGCGGTTACTGTGCGCGCCCGTGCAGATGTCCAGCCGCCCAACCCAGCGAACCGTGCCATCGTGTACGTCCAGTTCGCCACGTACCGCCGTACCTACACTGTCGTTATCAACGGCAACTCGGACGGCACAGGCGGGCAGCGGTATGCTCTGACGATGCCGGGTTCCACCTACAGCAACGGGGAGAGCAAGGCGAACTTCGCAGCCGAGCGTATCAAGACGGACGATGTGGTGAAGCGACTTGCGCACATGATGCGTGAGGGTATCGCGACAGGTGACTGGGGCACCAACCCAGAGGCTGCCGATCCAACCTACGGCGCAGCGGTTTATCCCGAGCGCATGAACGTTGAGGTGTACGGCAACTGCATGTTCATCACGCACCCGAGCGACAACATCAGGACCATCACGACCATCGACGGTGCCAACGGCGCTGACATGATCGCGGTCCAGAACACGGTGAAGTCTCCAGCCTACCTGCCGCCCTACGCGCCAGTGGGTTGGGTTCTGCTGATCCAGAACACCGAGGGTGTCAAGAAGAACAACTACTGGCTCAAGGCAACCGGCACCGATGGTTCCAAGGTCAAGTGGGAAGAGTCGCTTGAGGGCGGCGCTAAGCTGGGTTTCGATAACCGCACGATGCCACACCAGTTGTACCGGGACCAGATCGTCAATGGCGTGCCACAGTTCAAGCTACAGGCTGCGCCGTGGGATGACCGGGCGGTGGGCAATGACACCTCGGTGCCGTTCCCTTCGTTCCTGAATCAGACAGTGCAGTCCGTGGGTACGTTCCAGAACCGGCTGTTCTTCACCAGCGGCGAGTCGGCGATCTTCACCCGCTCCAATGACTTCTACAACTTCTTCAAGGAGTCGAGTCAGACAGAGACGGACGCTGATCCCATCGATGTGTTCTCGGACAGCGAGAAGGTGAACAACATCAGGAACTCCGTTACGGTGGATGGTGATGCCATCTTCTTCGCCAGCAACGGTCAGTTCATGGTTGAGGGCAGCAAGCCGGTTACCCATGCGAACGTGGTGTTCAAGCAGGTGACCTCATTCCCGATGAACATCTATGCGAAGCCCGCCATCACTGGTGAGTCGATCATGTTCGCGTATGACGCAGGCAACTGGTCAGGCATCCGCGAGATGTTCACCGACAGCGACAAGGACACCAAGACCGCACGGCCAATCACCGAGCACGTCGAGAAGCTGATCCGGGGCGAAGTGCGCCAGCTCAGCAGCAACCCGAACACCAACACGCTGATCGTCAGGACTGACACCGACGCCCACATCGCCTACATCTACGACTGGCTATGGCAGGGTGCCGACAAGGTTCAGGCAGCGTGGCACAAGTGGACCTTCGACAATGGCTCCAAGCTGTTGCACGTCCAGTTCGTGGATGATGATGTGTACATGATCTTCCTGCACGCTGACGGGCTGGTGTACCTTGAGCACATGCCGCTGACCAACGATGACAACGACGAGGGGATGGACTTCCCTTGCCGTCTGGATCGCAAGATCACCATCAAGGCAACGTGGTATCCGAACTTGCAGAAGTGGGGCTTCACAACTCCCTTCGTGATCCGAGATGCAGACCTGCCTAACTGGCTAGCCGTCTGCGCCACGGGCTGCTACCGGGCAGACATCGGCACTGAGTTTGAGTTCGCCCGCTCCTTCGGCAACACGAACTTCACGACCGACATCAGCCTGCAAGACCCAGCGGTTGCCACTGAGGTGACCATCGTGCTGGGCCGCAAGTTCATCAGCCGCTACATCCCAACCCAGCCGTTCATTCGTGACCAGCAAGGATTGGTGATGAGTATCGACCGCATGACGATGGGCCGTATGAATGTCAACTACGACAGGACCGGGGCCTTCAAGGTGCTGGTCAGTGACCAGATGGGTCGCCAGTGGAAGTACCCCTTCTATGGCCGCTCGATGGGCAGCTTCAACAACAAGGTAGGGTTCGCACCGCTCATCAGTGGTACGTTCCCATTCCCCGTCCGATTGTTCACGCACGATGCGACAATCGAGATTCAATCCGATAGCCACCTGCCGCTCCAGATTCGTGGGTTAGAGTGGGAGGGCAGCTATCAGCAAACAGGCCGGAGGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94f81f03d2c16e5f4345f89ee8d78626baaba6874e5ddbb8706a9bfc8c586e78
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50