Protein

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Genbank accession
WXX18517.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSVETARTIDQLDNSLPRNVDLIREGDDHLRLIKSVLKTSFPNFNSVMSMSSDKLNNLDKALTATDKDGNLTFGGAMTMTQGKTLNMGNNRLQNVSNPAADTDAVTLGYLKSPAARSLAYPVGSVYFSVTATNPAQSLGFGTWVNVGQGRFIVGVGTGTDGRGTQRGFGVGNNNNGFYESQLNANHLPPHAHGVDINTQGGGNHQHFYNRWTRSEGGMQNAGHVGHGSQEAGFIRSGTEWAGEHGHRVLGNTQNTGGGARFDSFPVGFGLYIWQRTA
Physico‐chemical
properties
protein length:277 AA
molecular weight: 29658,31940 Da
isoelectric point:8,08332
aromaticity:0,08303
hydropathy:-0,51588

Domains

Domains [InterPro]
DC_0570
ATT
1–63
DC_0570 IPR053827
WXX18517.1
1 277
Architecture
ATT
ATT
ATT 1-63 | ATT 118-276 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXX18517.1
1 277
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,9770
Central domain 84 266 184 0,0157
C-terminal 267 277 10 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-266
C-terminal
267-277

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea bacteriophage TacPo2
[NCBI] 		3134916 No lineage information
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXX18517.1 [NCBI]
Genbank nucleotide accession
PP496723 [NCBI]
CDS location
range 42869 -> 43702
strand -
CDS
ATGAGTGTAGAAACCGCTCGTACAATTGACCAACTTGATAACTCCTTACCTCGTAACGTTGACTTGATTCGTGAAGGTGATGACCATCTGCGACTGATTAAATCTGTCCTGAAGACCAGCTTCCCTAACTTCAATTCCGTAATGAGTATGTCGAGTGACAAGCTCAACAACCTTGATAAAGCTCTGACAGCAACTGACAAGGATGGTAATTTAACGTTTGGTGGTGCTATGACCATGACTCAGGGTAAGACCTTGAACATGGGTAATAACCGCTTACAGAACGTTTCCAACCCTGCTGCTGATACTGATGCTGTAACTCTTGGTTATCTGAAATCTCCAGCCGCTCGTTCTCTGGCATATCCAGTAGGCTCTGTCTACTTCTCTGTGACAGCAACTAACCCAGCACAATCTCTGGGCTTCGGTACTTGGGTTAACGTAGGTCAAGGTCGATTCATTGTAGGTGTTGGTACTGGTACTGATGGACGTGGTACTCAGCGTGGCTTTGGTGTTGGTAATAACAACAATGGCTTCTATGAGTCTCAGTTGAATGCTAACCATCTTCCACCTCACGCCCACGGTGTTGACATTAACACTCAGGGTGGCGGTAATCACCAACACTTCTACAACCGTTGGACTCGTTCCGAAGGTGGTATGCAGAACGCTGGTCACGTAGGTCATGGTTCTCAGGAAGCTGGCTTCATTCGTAGTGGAACTGAATGGGCAGGTGAACATGGACACCGTGTGTTAGGTAATACCCAGAACACAGGTGGTGGTGCTCGTTTCGACTCCTTCCCTGTAGGTTTTGGTCTGTATATCTGGCAACGTACTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9bcd4e0a499c5f9c5a7e938d269aef581e88c893d01127bc351324b9a8f3a31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7386
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Could bacteriophages be used as a novel pest management tool to control gut endosymbionts in Western Flower Thrips? Krueger,S., Kroj,A., Lehnherr,T., Lehnherr,H. and Stuiver,M. 2024 — GenBank