Protein

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Genbank accession
QSL99533.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATKKKLLQAAAGQAGGGAALNVEDVFSTYLYQGNGSTQTITNGIDLDGEGGLTWIKSRGDNGAGPENHQLFDTERGANKVLQSNSTLAEATYTQRLTSFNSDGFSVGSDYDVNNPSPTFASWTFRKAPKFFDVVTYTGDGVNGREIAHDLGCDVGFMIVKRTDTTSSWHCWHNSGTTTNGYIELDQASTYSTYTGLWNNTSPTSTAFTLGTDSVVNASGGTYVAYLFAHNDGDGDFGADGDADIIKCGSVTIGGSGNATVNLGFEPQWLMVKNATSGGYDWQILDTMRGFRASPDNNAPALFANTSGSESGQGDPNLTSTGFEWDGGGGAPNQTYIYMAIRRGTKVPESADEVFSLALRDTSKPHFNATSSHVDMAFKIYTLSGYGDSWKKYIQSRLTGTRHLKTNSNETEGINSENTWDHHNGWSEDPGSVDYFSWMWKRAPGFFDAVAYTGSSPAFASAINHNLGVVPEMMWVKNRNGTSGGTRPWIVYHKDTGNAGYFKLNETSALITSDPESKFGNTNVAVGPTADVFYVAGDYEVNYSGDTYIAYLFASLDGISKVGSYTGNGSSQTIDCGFTSGARFVLIKRTDSTSDWFVLDSERGIVAGNDPLLALNGNGAESTGYDIIDPESSGFIINETAWNTNVSGASYIFYAIA
Physico‐chemical
properties
protein length:657 AA
molecular weight: 70497,01060 Da
isoelectric point:4,69009
aromaticity:0,11872
hydropathy:-0,40274

Domains

Domains [InterPro]
IPR055906
STR
25–341
IPR055906 IPR055906
IPR055906
STR
25–345
IPR055906
QSL99533.1
1 657
Architecture
STR
STR
STR 25-345 | STR 447-657
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QSL99533.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0013
Central domain 11 209 200 0,0013
C-terminal 210 657 447 0,9962
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-13
[NCBI] 		2813173 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSL99533.1 [NCBI]
Genbank nucleotide accession
MW514247.1 [NCBI]
CDS location
range 30260 -> 32233
strand -
CDS
ATGGCTACTAAAAAGAAATTACTTCAAGCCGCTGCTGGTCAAGCTGGTGGTGGTGCTGCCTTGAACGTAGAAGATGTGTTCAGCACTTATTTGTATCAGGGCAATGGCTCTACACAAACGATCACCAATGGCATTGACCTTGATGGCGAAGGTGGGCTGACTTGGATTAAAAGTCGTGGTGATAATGGTGCAGGGCCAGAAAACCATCAGCTTTTTGACACTGAGCGTGGTGCAAACAAAGTACTCCAATCTAACTCAACTCTAGCGGAAGCTACCTACACTCAAAGGCTTACTAGCTTTAACTCAGATGGATTTTCTGTAGGAAGCGACTATGATGTAAACAACCCTTCTCCAACATTCGCCTCTTGGACATTCCGCAAAGCCCCTAAGTTTTTTGATGTGGTGACTTACACTGGGGATGGTGTTAATGGCCGTGAGATTGCACATGATCTTGGATGTGACGTTGGCTTTATGATAGTAAAAAGAACAGACACAACAAGCTCTTGGCACTGTTGGCATAACTCAGGGACTACAACTAATGGTTATATAGAACTGGATCAAGCTAGTACTTATAGCACTTACACAGGCTTGTGGAATAATACTTCGCCAACATCTACAGCTTTTACATTAGGTACGGATAGTGTTGTCAACGCCTCTGGTGGCACATACGTAGCCTACCTCTTCGCCCACAACGATGGTGACGGTGATTTCGGTGCTGATGGTGATGCTGATATTATCAAGTGTGGTTCAGTTACTATTGGTGGAAGTGGTAATGCAACAGTAAATTTAGGTTTTGAACCACAATGGCTTATGGTTAAAAACGCCACCAGCGGTGGGTATGATTGGCAAATACTTGATACAATGAGAGGCTTTAGGGCATCCCCCGATAACAACGCACCAGCACTTTTTGCAAATACAAGTGGTTCAGAGAGTGGACAAGGTGATCCAAACTTAACTTCAACAGGATTTGAGTGGGATGGCGGTGGAGGTGCGCCGAATCAAACCTACATCTACATGGCAATCCGCCGTGGGACTAAAGTGCCTGAGAGTGCGGATGAGGTGTTTTCATTGGCATTAAGAGATACATCAAAGCCTCATTTTAATGCTACTTCTTCTCACGTTGATATGGCTTTTAAAATCTACACACTTAGTGGTTATGGTGATAGTTGGAAAAAGTATATTCAATCACGACTTACGGGCACAAGGCATCTGAAAACCAATTCCAATGAGACTGAGGGGATTAATTCTGAAAATACATGGGATCACCATAATGGGTGGTCTGAAGACCCCGGCAGTGTTGATTATTTCTCATGGATGTGGAAACGTGCGCCGGGCTTCTTCGATGCGGTTGCTTACACAGGTAGCTCACCAGCGTTTGCAAGTGCTATAAATCACAACTTGGGTGTAGTTCCTGAAATGATGTGGGTGAAGAATCGTAATGGTACGAGTGGTGGTACTAGACCTTGGATTGTTTATCATAAAGATACAGGTAATGCTGGATACTTTAAGTTAAACGAAACATCTGCTCTTATTACTAGCGACCCAGAGAGTAAGTTTGGTAATACCAATGTAGCAGTAGGACCAACCGCCGATGTTTTTTATGTAGCAGGGGACTATGAGGTTAACTACTCTGGAGACACCTACATAGCCTACCTCTTCGCAAGCCTTGATGGTATATCGAAGGTGGGGAGCTACACGGGAAATGGCTCTAGTCAGACTATCGACTGTGGCTTTACGTCAGGTGCTAGGTTTGTGTTGATTAAGCGTACAGACAGCACGAGTGATTGGTTTGTTCTAGACAGCGAGAGAGGTATTGTTGCAGGCAATGACCCTCTTCTTGCCTTGAACGGCAATGGTGCTGAAAGCACGGGTTACGACATAATTGATCCAGAAAGTTCTGGGTTTATTATAAATGAAACCGCTTGGAACACCAACGTCTCAGGCGCATCTTACATCTTCTATGCGATTGCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f5cc1ed46dd5f4c87d08e5c3ff5fe9c9ef967e765b6395fab11ac8947b14f123
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two novel RCA phages reveals new insights into the diversity and evolution of marine viruses Zhao,Y. — — GenBank