Protein

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Genbank accession
YP_009835985.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGLFFNRSGDRVTVDQIVLENSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTASGKFYAGEQSRSPWDIVGEVVADDVRPVYWQDLTDDQKATAAAKYHNGEGTPEDYFTYTPDQFIVINGDVYDLDAEAAVYEVEGLKGHVRILESTKADGGALAVQCVEGWEVISVYRVQVTS
Physico‐chemical
properties
protein length:182 AA
molecular weight: 20294,49100 Da
isoelectric point:4,87419
aromaticity:0,12088
hydropathy:-0,26923

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage KFS-SE1
[NCBI] 		2048975 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus KFSSE1 >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009835985.1 [NCBI]
Genbank nucleotide accession
NC_048683.1 [NCBI]
CDS location
range 54963 -> 55511
strand +
CDS
ATGAAACTGAATATCACCGCGCCGGGCCTTTTCTTTAATCGTAGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTAGAAAATAGCGCCGGGGCCGTCGTGTCATTCCCTGTTAAGGGCCGGATCTGGAAAATGTACCGGGGCGCATATCGTCCGCGTGAGTTTAAGATCTGGACGGCATCGGGCAAGTTTTACGCGGGCGAACAATCCCGATCGCCGTGGGATATTGTCGGCGAGGTTGTCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGACGGCGGCGGCCAAATATCACAACGGTGAAGGCACGCCGGAAGATTATTTTACCTATACGCCGGATCAATTCATCGTGATTAATGGTGACGTGTACGATCTGGACGCCGAAGCGGCCGTTTATGAGGTCGAAGGGTTAAAAGGTCATGTGCGCATACTGGAAAGCACGAAGGCGGACGGGGGCGCGTTGGCGGTGCAATGCGTCGAAGGTTGGGAAGTCATAAGCGTTTACCGTGTACAGGTGACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
170fc705f6b395cd40de869fbc9fb12e957c9961b740d1543f0406cfdb134a53
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella phage KFS-SE1 Lee,J.-H., Park,M.-K., Choi,I.Y. and Kim,H.-J. 2011-12-15 — GenBank