Protein

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Genbank accession
CAM0068213.1 [GenBank]
Protein name
internal virion protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAAIKLFTFKGEVPSYAPHLLPNEAATIAKDCHFDGGELNPIMESLDTGDTVPSDTGTLFRYEDQHWFSWVGDVDAIKSPIARDQWRRVYWTDGAYPKVTYNTIFNGQGRLPVASYRLGVPAPTTAPIITSFTKARDPEEEVTIFYVTTYSSAVGEEGMPGPVSLEVECFPVGIEQDLPDDKKELSKVVLELQPPGTNNNNLNMINIYRTTATAGASEFLKVASVPIATSTYTDSTPDHSLTNILETENFSMPPDAMKGLCVMANGICAGFVENELLFSEAYLPYAWPEDYRLSIEEDVVAIEPIGTSLVVGTTGDPYLFSGVSPGNIASQRLEISQACSSKLSMCNIGMAVVYACPDGLVGIAPDGVMMMTDGIISPRQWRDMVDPSTIKAFRYEGKYVATHSKGAFIFDPITKDFRQLSASFSVGYTDARDESLYYIVAGKVFKFQGGPNSLELTWRSKEYVGISKSFSCVRIDAEDINAVSFKYFVNGNEVFSRSKGQVKTTFTLPSVRGDSCQFELSSNSKIQTIRVATSKQELKE
Physico‐chemical
properties
protein length:540 AA
molecular weight: 59320,34540 Da
isoelectric point:4,79257
aromaticity:0,10370
hydropathy:-0,16407

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0068213.1
1 540
Domain Start End Length (AA) Confidence
N-terminal 1 422 422 0,8393
Central domain 423 529 108 0,0063
C-terminal 530 540 10 0,9928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-422
Central
423-529
C-terminal
530-540

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage K248
[NCBI] 		3105527 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0068213.1 [NCBI]
Genbank nucleotide accession
OZ196562 [NCBI]
CDS location
range 13471 -> 15093
strand +
CDS
ATGGCTGCAATTAAGTTATTCACATTCAAAGGAGAGGTGCCGTCATACGCACCTCATTTGCTGCCTAATGAGGCGGCCACCATAGCGAAAGATTGCCACTTTGATGGTGGCGAACTTAACCCAATAATGGAAAGCCTAGATACTGGCGATACTGTTCCGTCCGATACTGGCACCTTATTCCGATATGAAGATCAGCATTGGTTTTCTTGGGTTGGCGATGTCGACGCAATAAAAAGCCCGATAGCGCGAGATCAATGGCGCCGGGTTTACTGGACCGATGGTGCTTACCCAAAAGTAACCTACAACACTATCTTTAATGGGCAAGGGCGTTTACCCGTAGCTAGCTATAGGCTTGGCGTTCCAGCTCCTACCACTGCACCTATTATTACAAGCTTTACCAAGGCTAGAGATCCTGAAGAGGAAGTTACGATCTTCTACGTTACGACCTACAGTTCTGCAGTTGGTGAGGAAGGAATGCCAGGGCCGGTATCTTTAGAGGTCGAGTGTTTTCCTGTTGGTATTGAGCAAGATCTACCAGATGACAAGAAAGAGCTATCAAAGGTAGTACTGGAGCTTCAGCCACCAGGTACGAACAATAACAACCTGAACATGATCAACATATACAGAACAACGGCGACCGCTGGCGCGTCCGAGTTTTTAAAGGTTGCTTCCGTTCCTATTGCTACATCTACCTATACCGACTCAACACCAGATCACTCACTAACCAATATCCTTGAGACTGAAAATTTCTCAATGCCGCCCGATGCAATGAAAGGTCTTTGCGTTATGGCTAACGGTATTTGTGCCGGGTTTGTTGAGAATGAACTTTTGTTTTCAGAAGCTTACCTTCCTTACGCTTGGCCCGAAGATTACCGACTATCAATAGAAGAGGACGTGGTAGCGATCGAGCCTATTGGCACAAGCTTGGTTGTTGGGACCACTGGCGATCCTTATCTGTTTAGCGGTGTAAGCCCTGGCAACATTGCAAGCCAAAGGTTAGAAATATCTCAAGCGTGCTCTTCAAAGTTATCAATGTGCAATATAGGCATGGCAGTTGTTTACGCCTGCCCTGACGGTTTGGTTGGTATTGCTCCAGACGGTGTAATGATGATGACTGACGGGATTATTAGCCCTAGACAATGGCGCGATATGGTTGACCCGTCGACTATCAAAGCATTTCGATATGAAGGCAAATACGTTGCAACGCACAGTAAGGGCGCGTTTATATTCGATCCTATTACCAAAGACTTCAGGCAGTTATCTGCGAGCTTTAGTGTTGGTTATACGGACGCACGCGACGAGAGTTTATACTATATCGTTGCTGGCAAAGTATTTAAGTTTCAAGGCGGCCCTAACAGCCTAGAGCTTACCTGGCGCTCAAAAGAATATGTTGGTATTTCTAAATCGTTTTCATGCGTGCGCATTGATGCTGAGGACATTAACGCGGTTTCATTCAAGTATTTTGTTAACGGCAATGAGGTATTTAGCCGAAGCAAAGGGCAAGTCAAAACCACCTTTACGCTTCCGTCAGTTCGTGGTGATAGCTGTCAATTCGAGTTATCATCTAATAGTAAGATTCAGACTATTAGAGTTGCTACGTCAAAGCAGGAGCTTAAAGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f890d0dbf85d6b93d0506ab0014fbafaa70c95b85137c44b5e4d4af40df02a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9415
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50