Protein

View in Explore
Genbank accession
WVX87403.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MSFDFTPAFRAKTGLDAAGENAINIAAPRPGEMLDAVNQEYFIRNNTVQPHDPNRGYDQGFVVSYADRLYSAKATIGAKPWDANDWTKLRTDPVWRDMSPQTVTQAFAGDYIHLNTSVARFNAQLPATPKVGEMVVFHDRTGHAHLRPVEIERNGQTIDGKQENYMMNIPFSTVYFYYTASNTWIYSLQYQPRMKILENGSATEGSPYKLATGEIVYGRTSGGKFWFVLPAYPNDNDRVVLADLDGKNSISYSQVSIDPAAAGDQIEDARGQLHTSIESNLSGEVHLIYNKATKVWRTYITDLRGRVVRVNVPTFQSEPFQVLYITHEFEDLIVVLLPKRPAHGNWVDLVNTLSTPTSRVIVRLHADSIAAGTTILGDVNSVLKRKYKDIPKVISEEPVGTEFEFPIGDHGVDMRIHYDGDSDQWITGSVQYRIDRADETNPSRPGLIPIAIQSEVNKQNYAPDGQVDVVQPDTAVTPATLDKRRSTEALAGLARIATASELQLPTDGIHRNDVIVTPQRLNERQATETIRGVAEVATQTETRSETNDTHLITPKKFHAAQAEEGLSGVARLVQAGGNKRTSRIGNGTGVFDATNHLRIVTPKMLDEYRATENQPGSLWVATAGEIRINDSTVDDAIITPKKFAAWKASATIRGIAARATAAEAQATSGTGERWDNVFITPETLNARTPTESRRGVVEIATQGEVDLGTDDIRFISPLKFATWQGYDHFVTDGDTDGLRHTGNLWDSVTLAIDLSSETQRGTMRVATQVEANEQIAPLDNVALTPKKLNDRRASVSLYGISRLATDAEIDAGAVGKAAGSPVAVTPVDLLRWTRTSPNSRSTTTRYGTARDALTSETWVGNPTQGSTQAVNDYLQDGINVTPRGLNFALANYLPRLGKAADSDKLDNLDSTQFARRDIDQTINGSYTFNGKNVILGGAGVLAIAKDGDNDSAAILSYALGANPTLTIDTPAPWQFDVTDTLGVVKLGIKSDGFIVVDKGATFGAAITENEATANGASPGTGTLRQKYLGINNNAASASKWQTARTITFTGDVDGTTSLDGSANVIASLQVKDNSHNHAAENITTGTLDSARTQQASHTTRGTVQLTADRTGQSQTLAASQKALYDIDQILQTATQNKGVYDYITFREWIQIGSVRMSANSEGILEFTYGHPIQA
Physico‐chemical
properties
protein length:1174 AA
molecular weight: 127745,46070 Da
isoelectric point:5,44611
aromaticity:0,07325
hydropathy:-0,39514

Domains

Domains [InterPro]
DC_1946
ATT
1–192
DC_1946 DC_1209
IPR036240
STR
80–191
IPR036240
IPR027411
Unmapped
96–191
IPR027411
WVX87403.1
1 1174
Architecture
ATT
STR
ATT 1-192 | STR 361-1144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage EniLVp02
[NCBI] 		3116828 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX87403.1 [NCBI]
Genbank nucleotide accession
PP209424 [NCBI]
CDS location
range 35884 -> 39408
strand +
CDS
ATGAGCTTTGATTTTACCCCCGCATTCCGTGCGAAAACTGGGCTTGACGCAGCCGGGGAAAACGCGATTAACATCGCCGCACCACGTCCCGGTGAGATGCTGGATGCGGTGAACCAAGAATATTTTATCCGCAATAACACAGTCCAGCCGCATGACCCGAACCGTGGTTATGATCAGGGCTTTGTTGTTTCATACGCAGACCGACTATATAGCGCAAAGGCGACGATTGGTGCAAAACCATGGGATGCGAACGACTGGACGAAACTCAGAACGGATCCGGTCTGGCGTGATATGTCTCCCCAGACAGTTACCCAAGCGTTTGCCGGGGACTACATCCATCTGAATACGTCGGTTGCCAGATTCAATGCGCAACTTCCAGCGACCCCAAAGGTCGGGGAAATGGTGGTGTTCCATGACCGAACTGGTCACGCCCATCTGCGCCCGGTCGAAATTGAACGAAATGGTCAAACCATTGACGGCAAACAAGAAAACTATATGATGAATATTCCGTTTTCGACAGTGTACTTTTATTACACAGCGTCGAATACATGGATCTATTCATTGCAATACCAACCACGGATGAAGATCCTTGAAAATGGATCGGCAACTGAGGGTAGTCCATACAAACTAGCAACTGGCGAGATCGTATACGGTCGAACCAGTGGCGGCAAGTTCTGGTTTGTTCTTCCGGCATATCCGAACGACAATGACCGGGTTGTGTTGGCTGACTTGGACGGGAAAAACTCGATCAGTTATTCACAGGTGTCTATCGACCCAGCGGCGGCTGGTGACCAAATTGAAGATGCGCGCGGACAGCTTCACACGTCGATTGAAAGCAACCTGTCCGGTGAAGTGCATCTGATTTACAACAAGGCGACGAAGGTCTGGCGAACCTATATTACCGATCTACGTGGTCGGGTTGTGCGGGTTAACGTGCCGACGTTCCAGAGTGAACCGTTTCAAGTTCTGTACATCACACATGAATTTGAAGATCTGATTGTCGTTCTGTTGCCAAAACGCCCGGCGCATGGTAACTGGGTGGACTTAGTTAACACGCTGTCGACTCCGACGTCGCGGGTTATTGTTCGACTTCATGCCGACTCGATTGCAGCCGGGACAACCATTCTGGGCGATGTCAATTCGGTACTGAAACGCAAGTACAAGGATATTCCGAAAGTCATTTCAGAAGAACCTGTCGGCACCGAGTTTGAGTTCCCGATCGGGGATCACGGTGTTGATATGAGGATCCACTATGACGGCGATTCTGATCAGTGGATCACTGGTTCTGTTCAGTATCGGATCGACCGGGCAGACGAAACCAACCCAAGTAGACCGGGTCTGATCCCAATCGCGATCCAGTCCGAAGTGAATAAGCAGAACTATGCCCCGGATGGACAGGTCGACGTCGTTCAACCAGATACGGCAGTCACCCCGGCGACGTTGGATAAGCGACGTTCAACCGAGGCGCTTGCTGGTTTGGCTCGGATTGCAACCGCGAGTGAATTGCAGCTACCGACTGATGGTATCCACCGAAATGATGTTATTGTTACCCCACAGCGTCTAAATGAGCGTCAGGCGACCGAAACCATCCGAGGGGTGGCAGAGGTAGCAACTCAGACAGAAACCCGTTCTGAGACGAATGACACCCATTTAATCACCCCTAAAAAATTCCATGCCGCACAGGCGGAAGAAGGACTGTCCGGGGTTGCTCGACTGGTTCAAGCCGGTGGAAACAAACGGACGTCTCGCATTGGCAACGGCACCGGGGTATTTGACGCAACTAATCACCTTCGTATTGTCACTCCCAAAATGCTGGACGAATACCGGGCAACGGAAAACCAGCCGGGTTCGCTATGGGTTGCAACTGCGGGTGAAATTCGAATCAATGACTCGACGGTAGATGACGCCATTATCACCCCGAAAAAGTTTGCCGCATGGAAAGCGTCGGCGACGATTCGCGGTATTGCCGCACGGGCTACTGCTGCCGAGGCACAGGCTACGTCCGGAACCGGTGAACGTTGGGATAATGTGTTCATTACTCCCGAGACGTTAAACGCCCGAACACCTACCGAAAGTCGGCGCGGTGTGGTTGAAATAGCTACACAGGGCGAAGTTGATCTAGGAACTGATGACATTCGATTCATTAGCCCATTAAAGTTTGCCACATGGCAGGGTTATGATCACTTTGTCACCGATGGTGATACCGATGGTCTACGTCATACCGGCAACCTGTGGGACAGTGTAACACTGGCAATTGATTTGTCAAGCGAAACTCAGCGCGGGACGATGCGCGTTGCAACACAGGTGGAGGCAAACGAACAAATCGCTCCACTGGACAACGTCGCTCTGACCCCGAAGAAGTTGAATGACCGCCGGGCGTCAGTTAGCCTATATGGTATTTCTCGACTGGCTACGGACGCAGAAATTGACGCTGGTGCCGTGGGCAAGGCGGCGGGTTCTCCGGTTGCGGTCACCCCGGTTGATCTGCTTCGTTGGACTCGAACATCACCAAATAGTCGCTCGACGACAACCCGCTATGGTACAGCTCGCGACGCTCTGACCTCTGAAACGTGGGTAGGAAACCCGACACAGGGGTCAACACAGGCAGTCAATGACTATCTTCAGGATGGTATCAATGTGACGCCTCGGGGTCTAAACTTTGCACTGGCTAACTATCTGCCCCGATTGGGCAAGGCTGCCGACTCGGACAAGCTGGACAACTTGGACAGCACTCAGTTTGCCCGACGTGATATTGACCAGACCATCAACGGCAGTTATACATTCAACGGAAAGAATGTGATTCTGGGTGGGGCTGGGGTTCTGGCAATTGCCAAAGACGGCGACAACGACAGCGCGGCGATCTTGTCGTATGCACTGGGAGCTAATCCAACACTGACCATTGACACCCCGGCGCCATGGCAATTTGACGTCACCGATACACTGGGCGTTGTTAAACTGGGAATCAAGTCAGACGGGTTTATTGTCGTGGATAAGGGCGCGACGTTTGGTGCTGCAATAACCGAGAATGAAGCGACGGCAAACGGTGCATCACCGGGAACCGGAACCCTGCGTCAAAAATATCTGGGTATCAATAACAACGCCGCCTCGGCTAGCAAGTGGCAAACTGCCCGGACAATCACCTTCACGGGTGACGTCGACGGCACAACCAGCTTAGACGGTTCGGCTAATGTGATAGCGTCGCTACAGGTGAAAGACAATAGTCACAACCATGCGGCAGAAAACATCACAACGGGTACTCTGGACAGTGCGCGAACCCAACAAGCGAGCCATACAACTCGTGGTACAGTACAGCTAACGGCTGATCGAACCGGTCAGAGTCAGACACTGGCGGCATCACAAAAAGCGTTGTATGACATTGACCAGATCCTACAAACAGCAACCCAGAACAAAGGGGTGTATGACTATATCACATTCCGAGAATGGATCCAGATTGGGTCTGTTCGAATGTCAGCCAACAGTGAGGGCATTCTGGAATTCACGTATGGGCATCCAATCCAAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4902d36c6ee2afed509b50495e6ef335e62b766464c5bc28c75b1571a911fcf3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50