Protein

View in Explore
Genbank accession
YP_009789377.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MADRKLTHFKFFYNTPLTDYQNTIHFSSNNERDNYFLNENHFNAIDYKNIPFNFIRDRNMVNLEQMSWQDAQGINYCTFKSDFENRRYYAFVNQIEYVNDHVTRMYLVIDTVMTYTQGNVLSTVQNAFVERQHLPRDVYNYLLPSLRNNDDVIKASNKYYLNNYLEQFGGNLVLFQSSADLSKKFGTKKEPNLESSKGITYDYITSPVNLYVMNREDFNNFMDKMSKYPWITQNFQKIILIPATFINKDDLEAVKTQEDIKGLMTLKNDKLSNEWELKELRVPFERLQYMLNSNQDELKHLVRNEYLTIEIYSWNGDSLLLDAGKITERTGVKLKTKSIIGYHNEVRIYPVDYNSAPNEKPIKASDNSILIDTGSFLNTAITFDSFAEVPILIDNGLLAQSQQANKQKNAQSNLISNRINNVVNGNDLKSRFYDAVSIGSNLSPTALFSKFNDEYNYYKELRAEYKDLALQPPTVTSSQMGNAFQIANSINGLTMKIGVPAPFDMDNIQRYYFMLGFETNDQAGTPFPIDSWTVCNYLRMRGTYTIDGIDPMLLEQLKVLLETGVRFWHNDGTNNPMAQNVFKNKFRK
Physico‐chemical
properties
protein length:588 AA
molecular weight: 68361,26560 Da
isoelectric point:5,87916
aromaticity:0,12585
hydropathy:-0,53622

Domains

Domains [InterPro]
IPR031772
TAS
5–118
IPR031772
IPR031772
TAS
5–115
IPR031772
DC_0080
STR
87–431
DC_0080
YP_009789377.1
1 588
Architecture
TAS
STR
TAS 5-86 | STR 87-431 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Andhra
[NCBI] 		1958907 No lineage information
Host Staphylococcus epidermidis RP62A
[NCBI] 		176279 Bacillota > Bacilli > Caryophanales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009789377.1 [NCBI]
Genbank nucleotide accession
NC_047813 [NCBI]
CDS location
range 9242 -> 11008
strand -
CDS
ATGGCAGATAGAAAACTGACACATTTTAAATTTTTCTATAATACACCACTGACAGATTATCAAAACACAATTCACTTTTCATCAAACAATGAACGTGACAACTATTTTTTAAATGAAAATCATTTTAACGCAATTGATTATAAAAATATTCCGTTTAATTTTATACGTGATAGAAACATGGTGAATCTTGAACAAATGTCATGGCAAGACGCACAGGGTATCAATTATTGTACATTTAAATCTGATTTTGAAAATAGACGTTATTACGCGTTTGTCAATCAAATTGAATATGTCAATGATCATGTGACGCGTATGTATTTAGTCATTGATACAGTCATGACTTACACACAGGGCAATGTATTATCTACTGTTCAAAATGCATTTGTTGAACGTCAACATTTACCACGTGATGTCTATAATTATTTGTTACCATCACTGAGAAATAATGATGATGTTATTAAAGCCAGTAACAAATACTATCTGAATAATTATCTTGAACAGTTTGGTGGTAATCTTGTTTTATTCCAATCAAGTGCTGATTTATCTAAAAAATTTGGTACTAAAAAAGAACCAAACTTAGAATCTTCAAAAGGGATTACTTACGATTACATTACAAGTCCAGTTAATTTATATGTCATGAATCGTGAGGATTTTAATAACTTTATGGATAAAATGAGTAAATATCCATGGATTACACAAAACTTTCAAAAAATCATATTAATACCTGCAACATTTATTAATAAAGATGATTTAGAAGCAGTCAAAACACAAGAAGATATAAAAGGATTAATGACACTTAAAAATGATAAATTATCTAATGAGTGGGAATTAAAAGAATTACGTGTACCATTTGAACGATTGCAATATATGTTAAATAGTAATCAAGATGAATTAAAACATTTAGTCAGAAATGAATATTTAACGATTGAAATATATTCATGGAATGGTGACAGTTTACTACTTGATGCAGGAAAAATAACAGAAAGAACAGGTGTTAAATTAAAAACAAAATCTATTATTGGGTATCATAATGAAGTTCGTATTTATCCAGTAGATTATAACAGTGCACCTAATGAAAAACCAATCAAAGCAAGTGATAATTCAATATTAATAGATACAGGTTCATTCTTAAATACTGCTATTACATTTGATAGCTTTGCTGAAGTACCTATTTTGATTGATAATGGATTACTTGCTCAATCACAACAAGCTAATAAACAAAAAAATGCACAAAGTAATTTAATTTCAAATAGAATCAATAATGTTGTCAATGGTAATGATTTAAAATCAAGATTTTATGATGCTGTAAGCATTGGATCAAATCTTTCACCAACGGCATTATTTTCAAAATTTAATGATGAATATAATTACTATAAAGAATTACGAGCAGAATATAAGGATTTAGCATTACAACCCCCAACCGTGACAAGTTCACAAATGGGTAATGCGTTCCAAATTGCTAATAGTATTAATGGCTTAACCATGAAAATTGGGGTACCTGCACCATTTGATATGGATAATATCCAACGTTATTACTTCATGTTAGGTTTTGAAACGAACGACCAAGCAGGAACACCGTTCCCAATTGATTCATGGACGGTATGTAATTATTTAAGAATGAGAGGCACGTATACCATTGACGGTATTGACCCAATGTTACTTGAACAACTGAAAGTATTACTTGAAACAGGAGTCAGATTTTGGCATAACGATGGAACGAATAATCCAATGGCACAAAATGTCTTTAAAAATAAATTTAGAAAGTAG

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
A novel Staphylococcus podophage encodes a unique lysin with unusual modular design Cater,K., Sree Dandu,V., Bari,S.M.N., Lackey,K., Everett,G.F.K. and Hatoum-Aslan,A. 2017 — GenBank