Protein

View in Explore
Genbank accession
XNP00774.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MKIANIKNTGSGYAFVQFIIGGGSDYGAANVPVDIFSLSGRGLPSSPLTSENIDTWFTQRTLIAARPNAKRVNLGAVKKADASYDIYLHAPGGWIPSLWLNLLNVQANNGSITGPIIDRTGYSWITTEPTGIVYNSPSDYLLANDSTIPRTNVANTFSQPQAISVPSGNATLTLNGCTVSANNNNVLLLSTPSGSGGMSFRPNGDTNSAKQVVFDASNFTVTGLNANFSNAVTMSSTLRVNGSASLLGGVNVNGSVNSNGVVSKNGDIKTDSGNIELYNASPLIDFYFNKSNADFTARIINDAVDQLTFDCRSVRAMNDFTARGLIRACHNDAFVAWPIEDPNGGNGAILKAPSFISRFNVNGNAARCAMWLEEHRGYEHRAVIEVSKWGNSGTTQYWQFKSDGKISSTANGEVVFAGLSDINYKDNVVAYDGLQSLENIKAMNLVKFTYKDDAKKRERRGVIAQQVRNIDSCYVKESNASYQDDEGNVVENKKLVLDNNALLLDAICAIKALSAQVDELKEEIKNLKG
Physico‐chemical
properties
protein length:529 AA
molecular weight: 56971,97000 Da
isoelectric point:6,16643
aromaticity:0,08318
hydropathy:-0,24140

Domains

Domains [InterPro]
DC_1159
STR
1–528
DC_1159
IPR030392
CHP
420–524
IPR030392
IPR030392
CHP
420–470
IPR030392 Coil
XNP00774.1
1 529
Architecture
STR
STR 1-528 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNP00774.1
1 529
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0067
Central domain 11 209 200 0,6583
C-terminal 210 529 319 0,8376
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-529

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth93
[NCBI] 		3384151 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNP00774.1 [NCBI]
Genbank nucleotide accession
PQ657831.1 [NCBI]
CDS location
range 29489 -> 31078
strand -
CDS
ATGAAGATCGCTAACATCAAGAACACTGGAAGCGGTTATGCTTTCGTTCAATTCATCATTGGCGGAGGTTCTGATTATGGTGCGGCAAACGTCCCGGTTGATATCTTCTCCTTGTCTGGAAGAGGTCTTCCATCCTCGCCGTTGACAAGCGAAAATATTGACACCTGGTTCACTCAACGAACCTTGATTGCTGCCAGGCCAAACGCCAAGCGCGTTAATCTTGGGGCGGTAAAAAAGGCGGATGCTTCATATGATATTTATCTTCATGCTCCGGGTGGCTGGATTCCTAGCCTGTGGTTGAATCTTTTAAACGTACAGGCTAACAATGGGTCGATTACAGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAACCGGGATTGTATATAATTCACCGTCTGATTATTTGCTGGCTAACGATAGCACGATCCCACGAACCAACGTGGCCAACACGTTCAGCCAGCCGCAGGCGATCAGCGTACCAAGCGGAAACGCCACGCTTACCCTGAACGGATGCACTGTTAGTGCCAACAACAATAATGTGCTTTTGCTTTCAACTCCTTCTGGTAGCGGTGGGATGAGTTTTCGCCCAAATGGCGATACGAATAGCGCAAAGCAAGTTGTCTTTGATGCATCAAACTTTACTGTTACCGGATTGAATGCAAACTTTAGCAACGCTGTTACAATGTCAAGCACGCTGCGCGTTAATGGGTCTGCCAGCCTTCTCGGTGGCGTAAATGTTAATGGAAGCGTCAATAGTAATGGCGTAGTGTCAAAAAATGGTGATATTAAAACAGATAGCGGAAACATCGAACTTTACAATGCATCGCCGCTTATCGACTTTTACTTTAACAAATCGAACGCGGATTTCACGGCGAGGATTATCAACGACGCGGTGGATCAGCTAACGTTTGATTGTAGAAGTGTGCGCGCGATGAATGACTTCACGGCGCGAGGGCTAATTAGGGCTTGCCATAATGACGCATTCGTTGCCTGGCCAATTGAAGATCCAAATGGAGGCAATGGGGCTATCCTTAAAGCTCCATCATTTATCTCAAGGTTCAACGTTAATGGTAACGCTGCGCGTTGCGCTATGTGGCTTGAGGAGCACAGGGGGTATGAACATCGCGCCGTCATTGAGGTAAGCAAGTGGGGTAATAGCGGTACTACGCAGTATTGGCAGTTTAAATCAGATGGTAAAATTTCAAGCACTGCTAATGGTGAGGTTGTTTTTGCTGGCCTTTCTGACATTAACTACAAAGACAATGTTGTTGCTTATGATGGTTTGCAGTCACTCGAAAACATCAAAGCAATGAATCTTGTCAAGTTCACCTATAAGGATGATGCTAAGAAACGCGAGCGTAGGGGGGTTATTGCACAGCAGGTGAGAAATATCGATTCGTGCTACGTTAAAGAAAGCAACGCATCCTATCAGGATGATGAGGGTAACGTAGTTGAAAATAAGAAACTTGTGCTTGACAATAACGCGCTTTTGTTGGATGCAATTTGCGCAATCAAAGCTCTGTCTGCGCAAGTAGATGAACTGAAAGAGGAGATCAAGAATCTGAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ace09b77a39dabde14ddd7e2507414de5fa2c06fdf744cc2396a30bd68ac39e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6431
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank