Protein

View in Explore
Genbank accession
WWD12606.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAKNVISGSKGGSSKPYVPKEMEDNLISINKIKILLAVSDGECDETFSLRDLYLDDVPVMNDDGTYNYSGVSAEFRPGTQDQDYIQGFTDTSSEITVSRNLETDTPYVIAVTNKNLSAIRIKILMPTGVKQEDNGDLVGVSVTYAVDMAVDGGSYNEILSDTISGKTRSGYDRSRRIDLPAFNEQVLLRVRRVTPDSTSAKVTDLIKLQSYAEVVDAKFRYPLTGLVYVEFDSELFPNQIPRIAVKKKWKIINVPSNYDPVLREYHGAWDGTWKKAWSNNPAYILHDLITNQRYGLDQRELGIPLDKWSIYEAGQYCDQMVPDGKGGTEPRYLCDVVIQSQIEAYQLVRDICSIFRGMSFWNGESLSIVVDRPREPSYIFTNDNVVNGDFSYTFASEKSMYTQCNVTFDDEQNMYQQDVEGVFETEAALRFGYNPTSITAIGCTRRSEANRRGRWVLKTNLRSTTVNFATGLEGMIPSIGDVVAIADNFWNSALTLNLSGRVMEVSGLQVFLPFKVDARPGDFIMVNKPDGKPVKRTIANVSADGKTIELNIGFGFDVQPDTVFAIDRTDIALQQYVVTTITRGDNDDEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVMQPPENVAVSSYSRIVQGVSVETMVVSWDKVPYASLYEVQWRKDNSNWLNVPQTANKEIEVEGIYAGVYYVRVRSVSASGSTSPWSGIVTASLTGKVGEPGKPINLTASTNEVFGIRVKWGMPDGTGDTAYIELHQSPDGTAENSSLLTLVPYPQFEYWHSTLPAGKVVWYRVRSVDRIGNVSGWSDFVRGMASDDVTDIIGDILDDIWNTEGGKEIKENAIDSANKIKDQAQSIIQNALANDTDVRIMRKENGKRKAEFRQSIQLIADETEARVTAMTQLKAEFDEEITSEVTRLDQAIATESETRATAIEELKSQIGDDIQGQLTRVEEAIANETEARVSADTALTAKFGDVESALTEKLDSWAGVNGVGAQYAMKLGLTYNGQKYSAGMVMQLSNSPQGLISQILFDAGRFAIMTSSTGGTYTLPFVVENNQVFINSLLVKDGSITNAMIGNFIQSNNYVWNQSGWRLDKNGTFENYGSTPGEGAMKMTNETISVRDANGVLRVQIGRITGYW
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 126622,22420 Da
isoelectric point:4,68600
aromaticity:0,09115
hydropathy:-0,34163

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
2–875
IPR053171 IPR015406
IPR055385
ATT
92–217
IPR055385 IPR032876 IPR036116 IPR036116
IPR013783
STR
627–719
IPR013783 IPR013783
IPR003961
STR
628–716
IPR003961 IPR003961
IPR003961
STR
628–722
IPR003961
WWD12606.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-217 | STR 218-340 | ATT 341-491 | STR 492-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWD12606.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 506 506 0,8991
Central domain 507 1081 576 0,0463
C-terminal 1082 1141 59 0,8700
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-506
Central
507-1081
C-terminal
1082-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage BubbaBully
[NCBI] 		3098280 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWD12606.1 [NCBI]
Genbank nucleotide accession
OR896831.1 [NCBI]
CDS location
range 15516 -> 18941
strand +
CDS
ATGGCTAAAAATGTGATAAGCGGCAGTAAAGGCGGTTCATCAAAACCGTATGTGCCAAAGGAAATGGAAGATAACCTGATTTCGATAAACAAAATCAAGATCTTACTTGCTGTTTCCGATGGTGAGTGCGACGAAACGTTTTCATTACGTGACCTGTATCTTGATGACGTTCCGGTTATGAATGACGATGGCACTTATAACTATAGCGGCGTTTCGGCTGAGTTCAGGCCAGGGACTCAAGATCAAGATTACATCCAGGGATTCACTGACACCTCAAGCGAAATAACAGTGTCGCGAAATCTTGAAACAGACACGCCATATGTGATTGCAGTAACCAACAAAAACCTATCTGCGATCAGAATAAAAATTCTTATGCCTACTGGTGTAAAGCAAGAGGACAACGGCGATCTCGTTGGTGTAAGCGTAACATATGCCGTTGATATGGCTGTTGATGGCGGCTCATACAATGAGATTTTGAGCGACACGATAAGCGGTAAAACTCGCAGCGGTTACGACAGAAGCCGCCGAATTGATTTACCAGCTTTTAACGAGCAAGTATTGTTGCGCGTTCGCCGTGTTACTCCTGATAGCACATCGGCAAAGGTTACGGATCTGATTAAGTTGCAGAGCTACGCGGAAGTTGTAGACGCTAAATTTCGTTATCCGCTGACAGGTCTTGTTTATGTGGAATTTGATTCCGAGTTATTCCCGAACCAGATCCCACGAATAGCGGTAAAAAAGAAATGGAAGATCATAAACGTTCCGAGTAATTACGATCCTGTTTTGCGTGAATACCACGGCGCGTGGGATGGAACCTGGAAAAAAGCATGGTCTAACAATCCGGCTTACATCTTACACGATTTGATAACCAATCAGCGATACGGACTAGATCAACGTGAGTTGGGAATTCCACTTGATAAGTGGAGCATTTACGAGGCTGGGCAATATTGCGATCAGATGGTTCCAGATGGAAAAGGCGGAACAGAGCCGCGTTACCTTTGCGACGTTGTGATCCAAAGCCAGATTGAAGCATACCAGCTTGTAAGGGATATTTGTTCAATCTTCCGTGGAATGAGTTTCTGGAACGGTGAGAGCCTTTCAATTGTCGTTGATAGGCCGCGCGAGCCGTCTTACATCTTCACAAATGATAACGTTGTTAATGGTGATTTTAGCTACACATTCGCCAGCGAAAAGAGCATGTATACACAATGCAATGTGACTTTCGACGACGAACAAAACATGTATCAACAGGACGTTGAAGGGGTTTTTGAAACGGAGGCGGCGTTACGGTTTGGCTACAATCCAACGAGCATTACAGCGATTGGATGCACACGACGCAGCGAAGCAAACCGCCGCGGGCGATGGGTTCTGAAAACCAACTTGCGCAGCACAACGGTAAACTTTGCAACAGGTCTTGAGGGCATGATCCCGTCAATCGGTGATGTGGTGGCGATTGCGGATAACTTCTGGAACAGCGCATTAACGCTCAACCTTTCGGGGCGCGTTATGGAGGTATCCGGTCTGCAAGTTTTCCTACCGTTTAAAGTAGATGCGCGGCCAGGCGATTTCATCATGGTAAATAAGCCAGATGGGAAGCCAGTAAAACGCACCATTGCCAACGTGAGCGCAGACGGAAAAACCATTGAGCTAAACATAGGTTTTGGCTTTGACGTTCAGCCCGATACGGTGTTTGCGATTGACCGCACAGATATTGCATTGCAGCAATACGTTGTAACGACAATCACAAGAGGAGACAACGATGACGAGTTTACTTACTCAATCACCGCTGTTGAATACGATCCGAACAAATACGACGAGATTGATTACGGCGTTAACATCGACGACAGGCCAACAAGCATTGTGCAACCGGACGTAATGCAACCTCCAGAGAATGTTGCCGTTTCCTCTTACTCTCGCATTGTTCAGGGTGTTAGCGTTGAAACGATGGTTGTTAGCTGGGATAAAGTGCCTTACGCGAGCTTATACGAGGTTCAATGGAGGAAAGACAACAGCAACTGGTTAAACGTCCCACAGACGGCAAACAAAGAGATTGAGGTGGAGGGGATTTACGCTGGAGTTTATTACGTTCGCGTGCGATCCGTTTCTGCTTCCGGCTCTACGTCGCCCTGGTCTGGAATAGTTACCGCATCGCTGACGGGTAAAGTTGGCGAGCCTGGGAAGCCTATAAACCTTACTGCATCAACAAATGAGGTTTTCGGAATCCGCGTTAAATGGGGAATGCCAGATGGAACCGGAGACACGGCCTATATTGAGTTGCATCAATCACCAGATGGAACGGCTGAAAACTCAAGCCTTTTAACGCTTGTCCCATATCCGCAGTTTGAATACTGGCACAGCACGTTACCAGCGGGGAAAGTTGTGTGGTATCGCGTGCGAAGTGTTGACAGGATCGGCAACGTTTCCGGTTGGTCTGATTTTGTGCGCGGCATGGCTTCCGATGATGTGACAGATATCATTGGCGACATTTTAGATGACATCTGGAATACGGAGGGCGGAAAGGAAATCAAGGAAAACGCCATTGACAGCGCAAACAAGATTAAGGATCAGGCACAAAGCATCATTCAAAACGCACTGGCGAATGATACGGACGTTAGGATCATGAGGAAGGAAAACGGAAAGCGCAAAGCCGAATTTAGGCAATCAATCCAATTGATCGCAGATGAAACGGAGGCTCGCGTTACCGCAATGACGCAACTCAAGGCTGAATTTGACGAGGAGATCACTAGCGAAGTAACGAGACTTGATCAGGCAATTGCAACAGAATCAGAAACGCGAGCAACAGCTATTGAGGAATTGAAATCACAGATTGGTGATGATATCCAGGGGCAGTTAACGCGAGTTGAGGAGGCGATTGCAAACGAAACAGAGGCGCGTGTTTCTGCTGATACGGCATTAACAGCAAAGTTTGGCGATGTTGAATCAGCGCTGACTGAAAAACTTGATTCATGGGCTGGCGTTAATGGAGTTGGCGCACAGTACGCAATGAAATTGGGATTGACCTACAACGGGCAGAAGTACAGCGCCGGAATGGTCATGCAGTTATCAAACAGCCCTCAAGGGTTGATTTCACAAATCCTGTTTGATGCCGGAAGATTTGCGATCATGACGAGTTCGACGGGCGGAACGTATACATTGCCTTTTGTGGTGGAGAATAACCAAGTTTTCATTAACAGCCTGTTAGTGAAAGACGGTTCAATCACAAACGCCATGATCGGTAACTTCATCCAATCAAACAACTACGTTTGGAACCAATCAGGATGGAGGCTGGATAAAAACGGAACGTTTGAAAACTATGGCTCTACTCCTGGCGAGGGCGCTATGAAAATGACAAACGAAACGATCAGCGTTAGGGATGCAAACGGCGTTTTGCGTGTTCAGATTGGACGTATTACAGGTTATTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c3f2e43bc263ea798d34b4cf8f56920021eaa2ac2e4d5adf5a4618bd566ddc0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50