Protein

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Genbank accession
QNI21193.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAILFMQNELSGTVTDPNYYFTSSDVRVQVDTNTDAFDPEANRRATPRPNYNFSPFQVSPPPGDTKKYWVHFRFNQRNDTSRYVKLQIGEHPSSPSSNTNTVITVGYSDGRIQCQAAGEYCYETGKYDKAAQTEIDLHVDSNTGYFEVYCNGALIKTGTSNSAKSSYKMLYVWIDGGSTIPISELIITEDEPTLGMRLLTLTPDALASGNMSGDISDITEIGLDEAAMETEVAGANLFSLTDVHNTFASNSDLSIRAIDVKALVSKSAASELEYAQMTIKTDGEVHKELAPKQITATSPGRALSAFHEVNPKTGKAWTVAEVNTLEAGVEFAGTVADVDFIPHITFTTANSNNNYQGYRKDSTTLNNLISGGTWYDENGIPGGFIESVEWQNNYGRGIFKTNDGRKWAHGPNGVRLHFRETDGNIQTEQIPWNNTAKDYRRDGGYFYSWLKDRAGQVLEVMIEGY
Physico‐chemical
properties
protein length:465 AA
molecular weight: 51422,15270 Da
isoelectric point:4,88425
aromaticity:0,10323
hydropathy:-0,51204

Domains

Domains [InterPro]
DC_1212
STR
83–333
DC_1212
QNI21193.1
1 465
Architecture
STR
STR 83-333 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNI21193.1
1 465
Domain Start End Length (AA) Confidence
N-terminal 1 343 343 0,0512
Central domain 344 454 112 0,3332
C-terminal 455 465 10 0,9765
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-343
Central
344-454
C-terminal
455-465

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_pir03
[NCBI] 		2762667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNI21193.1 [NCBI]
Genbank nucleotide accession
MT811961 [NCBI]
CDS location
range 218552 -> 219949
strand -
CDS
ATGGCAATTTTATTTATGCAGAATGAACTGTCTGGTACGGTAACGGATCCTAACTATTACTTTACTAGCAGTGACGTTCGTGTACAAGTTGATACGAATACGGACGCATTTGATCCAGAAGCAAACCGTCGTGCAACCCCAAGACCGAACTATAACTTCAGTCCATTTCAAGTCAGTCCTCCTCCAGGTGACACCAAGAAATACTGGGTGCATTTTCGTTTCAATCAACGCAATGATACCTCGCGTTATGTGAAGTTACAGATCGGAGAACACCCATCGTCACCAAGCTCCAATACGAATACAGTAATCACGGTTGGTTATAGCGATGGCCGTATTCAGTGTCAGGCAGCTGGCGAATACTGTTACGAAACAGGCAAATACGACAAAGCTGCACAAACCGAAATCGACCTACATGTTGATTCGAATACGGGCTACTTCGAAGTATATTGTAACGGTGCTCTAATTAAGACAGGTACGAGTAACAGTGCCAAGTCTAGTTATAAAATGCTCTATGTCTGGATTGATGGCGGCAGTACGATTCCAATTAGTGAACTGATCATCACGGAAGACGAGCCTACACTAGGTATGCGTCTATTGACTCTGACGCCGGACGCTTTGGCATCGGGCAATATGAGCGGCGATATCTCAGACATTACTGAGATCGGCCTGGATGAAGCAGCTATGGAAACAGAAGTAGCTGGTGCGAATCTTTTCAGTCTTACTGATGTACACAACACCTTTGCCTCTAATTCTGACCTCAGTATTCGCGCGATCGATGTGAAAGCATTGGTAAGCAAGTCGGCTGCATCTGAACTAGAATATGCCCAGATGACAATCAAGACGGATGGCGAGGTTCACAAAGAACTCGCGCCTAAGCAGATCACTGCTACGTCCCCTGGTCGTGCTCTGAGTGCTTTCCATGAAGTCAATCCTAAGACAGGCAAGGCATGGACAGTAGCCGAAGTAAATACACTGGAAGCGGGCGTAGAGTTTGCTGGAACAGTTGCGGATGTAGACTTCATTCCACACATTACCTTCACTACTGCCAATAGCAATAACAACTACCAAGGTTACCGCAAAGATAGTACTACCTTGAACAATCTTATTTCTGGCGGTACATGGTACGACGAGAATGGTATTCCGGGTGGATTCATTGAATCAGTGGAATGGCAAAACAACTACGGTCGTGGTATTTTTAAAACCAACGATGGCCGCAAGTGGGCTCATGGTCCAAATGGCGTTCGATTGCATTTCCGCGAGACAGATGGAAATATCCAGACCGAACAGATTCCTTGGAATAATACAGCCAAGGACTATCGTCGTGACGGCGGCTATTTCTACTCATGGCTGAAAGATCGCGCAGGCCAAGTTCTTGAAGTAATGATTGAAGGTTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
99e6f442ef51ce67f1dc983f8fefa2b2924cda58bd47dbdd270dc727b6815cd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological and genomic characterization of a novel jumbo bacteriophage, vB_pir03 with broad host lytic activity against Vibrio harveyi N Misol,G. Jr., Katharios,P. and Kokkari,K. 2020-12-15 — GenBank