Protein

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Genbank accession
XYS98002.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSRLDKAYSRKPITLIRIAQESGLSEADLLDKMHPVNDSSFSGKADGMSIKIGGDIWVAQGRNPEDDWIKISGAGEQTAQPDLMVDSNKTYTGNARWASIPFVPSNNLNGREPILVNIDNRMRLRNDHADSKKVAIEVDLVLSTPLTTTQMDIQVYSNFNATITASPMLSRKMIADDQTQIYHRATIAFTVTVPVGKYVEVLAYSPNKDLTNVKQSLVRITEL
Physico‐chemical
properties
protein length:223 AA
molecular weight: 24723,81690 Da
isoelectric point:6,30637
aromaticity:0,05830
hydropathy:-0,33587

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage phiY2
[NCBI] 		3440546 Viruses >
Host Shewanella sp.
[NCBI] 		50422 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS98002.1 [NCBI]
Genbank nucleotide accession
PV800133.1 [NCBI]
CDS location
range 42841 -> 43512
strand +
CDS
ATGTCCAGACTTGATAAAGCCTACTCAAGGAAACCTATTACCTTGATTCGTATCGCTCAAGAGTCTGGCCTCTCTGAGGCTGACCTCTTGGATAAGATGCACCCTGTAAATGATAGTTCATTCTCAGGCAAGGCAGATGGTATGTCCATTAAGATTGGTGGAGACATCTGGGTTGCACAAGGTCGTAATCCAGAAGATGATTGGATTAAGATTAGTGGTGCGGGAGAGCAGACTGCACAACCAGACCTGATGGTAGACTCTAATAAGACCTACACAGGTAATGCACGTTGGGCCAGCATCCCTTTCGTCCCTAGCAACAACCTAAACGGAAGGGAGCCTATCCTCGTAAATATTGATAACCGTATGCGGCTCAGGAATGACCACGCTGATTCCAAGAAGGTTGCTATAGAGGTTGACTTAGTCTTAAGTACCCCTCTCACAACCACCCAGATGGATATCCAAGTTTACTCTAACTTCAATGCCACAATCACTGCATCTCCTATGCTTAGCAGAAAGATGATAGCTGATGACCAGACACAGATATACCACAGAGCTACTATCGCCTTTACGGTTACTGTACCTGTTGGTAAATATGTGGAGGTCTTGGCCTACTCCCCAAACAAAGACCTGACAAACGTCAAGCAGTCACTGGTTCGAATTACAGAACTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae2f8d2afee14b73ee24517a96787e2449115a589f2dbde059fa02656f097add
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5424
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50