Protein

View in Explore
Genbank accession
YP_011690477.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNKLVKRRFQAGLGSEIKRVYKEGQQINTLLLAQVIQVNYKYNTVDLLALQHKEVFQNSYANEGRFSARLPMEFGGRNIVGQPYGQVNPIAVGTVVLVGFINSDKDMPIVISVYNNNDVSKQLSRTQFSNSDPKDLELIGDMHQKFSLYPSLTYDSVDGEGGRVVTFSGKSFIAFDTKEVANSSTTDAGYGTKYEDLETSYYNNGDLIEPMKGRAPNVLFKHQGVLDDDGKPDLHDLLIHINPDGTYRTSMMNKEEDWRTLFEMTPDGRVKLRKQDSINIDGGIEISELGINNEGFVYLRNGDMDLEVRKDGIYSQGKLLTADVDLSDVYDKLNGLSIQIKETNGQLEIIANGVEEQNGKISELSTEITIVAGKVESKVTKTEVQDMIDSSFVDMSDAIKKAQEDADKANKVIADMSSDNRLTPSEKIDLLKEWDIIKNEYPSYLEQADTYEVDSKDYTAKYNSLELFVTPILADMESTSSVDGATLRKTFNSYYTARIALLNSISKKLKDGITEAMKKASQASLDATQAMADASQAKIDADNANKLISDIASDNKLTPSEKYQLKKEWDVIVKEYPTTIAQAEKYAVDTAEYTAKYKALELFVEPLFKDMDETSIVDGERLRATFSDYYASKIALLKEVTDSAKTELDAYGNKISVMETNITQTSEAITLLATRVQTVEDGVQSNKAQIEIQAEQISQKVTASEVKGIVDDSINNLTLGGTNLFVIKTQTAGLLNENDGTVGTAVDNSVVSDYIKVNQKTPYIATLYGNTGTNMIITDWYDKNRTFISGEAVADSGDFSKKYVSPENAVYARVSYKKANSVNIKFEAGTKATDYSPSWEDIKGDQTALEEYIKKVEEQAKKAQQDAENAKNDAENANNAIADMSNDNMLAPNEKKQILLQWEQIKTEYPINLDQATKFGVSSQQYTTAYNALDEYLKPILADMTTTSVVVGSTLRNTFNNYYDKRTTLLNRISDVAKNVADKAQETADTINDNLQNIGGYNYVGFSSGDNMLPRLMIKNVGYYTLGSSTTEFIDSMVAVKGDATTQPFDYTVGTSDKEIAGGGLADYRMKEVKEGQWLTASANVQVIGGGSARLAIYTLEGDNWVGSNSTPIQVSDGLKRVVAQRKVTGLTKGVLIRIESADTNVKEFRFGNVQLEVGIIPTPWKKSDIDIQEDINNVVQNIKTYTAWANDLQGLDFTREKVEGKTYMYVGTSMKDSDNYSDYTWRLTDEHIEGQINGKEGAWIYSPTAPTNPSQGLIWVDLSKVPNQPKRWVDSETGWVALTPEEVKDLPWGEDGTSLADWVSQAEQRISSDSIINTVLGSEDFTSVFDTKANTSDLGNLATYEDLDSIKEDYNRLIKEGINGIDFTPYVTNSELQQLKDSFNFSVQQAGGVNMLKNSLGFSGLDFWNGTVGKNLLPNSTWNLGFGRWGGTSITSFEILPPEDDKPTSNILASMPLRSSTKEIGNKPHPLKVNSGETYTVSFDYKEEALSYNKDRPILVVRNYPDKDTDQWMEYSIEGWAVMANGSTTDLTVWRRFTKTFTIGTSGYLDILPKTIIESWEHRSFWRELKIEKGTQATTWVPNKEDGAFTGDIVETIQTEELANLGFGSGFISSKRPSSSLTQSVELPEIGANLEYSLSFYMKVTTDNPVADFKCGIRVYDGGTLTYTLGIEDATQPIPLGFQQYKLVFTPTSTSTKIEMFVENGQEASVIISGIMYNIGSIPLKWQPYPSEIYNTNVKIDINGVTVKNNQTDGYTMITPQEFSGYSRIDGNIERIFTLNGQVTEVKMLKAEKRITMEPVSVFAMNTVTDTKRIRGWAFVPSFE
Physico‐chemical
properties
protein length:1825 AA
molecular weight: 202949,46940 Da
isoelectric point:4,73681
aromaticity:0,08932
hydropathy:-0,46230

Domains

Domains [InterPro]
DC_1874
ATT
67–513
DC_1874 DC_0015 Coil DC_0336
Coil
Unmapped
399–419
Coil DC_0015 G3DSA:2.60.120.260
YP_011690477.1
1 1825
Architecture
ATT
STR
RBD
STR
RBD
ATT 67-513 | STR 524-1537 | RBD 1538-1571 | STR 1572-1717 | RBD 1718-1798 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage PBEF129
[NCBI] 		2696337 No lineage information
Host Enterococcus faecalis
[NCBI] 		1351 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011690477.1 [NCBI]
Genbank nucleotide accession
NC_101774.1 [NCBI]
CDS location
range 28238 -> 33715
strand +
CDS
ATGAATAAATTGGTAAAACGTAGATTTCAGGCAGGTCTAGGCTCAGAAATTAAAAGAGTATATAAAGAAGGACAACAAATTAACACGCTACTATTAGCACAAGTAATTCAAGTAAACTATAAATATAATACAGTAGACCTACTAGCTTTACAGCATAAAGAAGTATTTCAAAATTCCTATGCAAATGAGGGACGTTTCTCGGCAAGACTTCCTATGGAATTTGGCGGTAGAAATATCGTTGGACAGCCTTATGGGCAGGTTAACCCGATAGCAGTAGGAACAGTAGTATTAGTTGGTTTTATTAATTCCGATAAAGACATGCCTATTGTAATTAGTGTTTATAATAATAACGATGTAAGCAAGCAACTTTCAAGAACACAATTTTCAAATTCAGACCCTAAAGATTTAGAGTTAATTGGGGATATGCACCAAAAATTTAGTTTATACCCTTCATTGACATATGATAGCGTTGATGGAGAAGGAGGACGTGTCGTTACTTTTTCTGGTAAATCATTTATTGCTTTTGATACAAAAGAAGTAGCTAACTCCTCTACAACTGATGCAGGTTATGGTACTAAATATGAGGACTTAGAGACATCATACTATAATAATGGTGACCTAATAGAGCCTATGAAAGGTAGAGCACCAAATGTACTGTTTAAGCATCAAGGGGTACTTGACGATGATGGCAAACCAGATTTGCACGATTTGCTAATTCATATTAACCCAGATGGTACTTATAGAACTTCTATGATGAACAAAGAAGAGGATTGGCGCACACTATTTGAAATGACACCAGATGGCAGAGTTAAATTAAGAAAACAAGACTCTATTAATATTGATGGTGGCATAGAAATAAGTGAGCTAGGAATCAACAATGAGGGGTTCGTTTATTTACGTAATGGGGATATGGATTTAGAAGTACGAAAAGACGGTATCTATTCACAAGGGAAACTGCTTACAGCCGATGTAGACCTATCCGATGTATATGACAAACTAAATGGGTTGTCTATACAGATTAAGGAAACAAATGGTCAATTAGAGATTATAGCTAATGGTGTAGAAGAACAAAATGGAAAAATATCAGAACTTTCTACAGAAATAACAATTGTAGCAGGTAAAGTTGAATCAAAAGTAACAAAGACAGAAGTTCAGGATATGATTGACAGTTCTTTTGTAGATATGTCTGATGCGATTAAAAAAGCACAAGAAGATGCTGACAAAGCAAATAAAGTGATTGCAGATATGTCTAGTGATAACAGACTGACTCCGAGTGAAAAAATAGATTTATTAAAAGAATGGGATATTATAAAAAATGAATATCCAAGCTATCTTGAACAAGCAGATACCTACGAGGTTGACAGTAAAGACTACACTGCTAAGTACAATTCATTAGAGTTATTTGTTACCCCTATATTGGCTGACATGGAATCAACTAGCTCGGTAGACGGAGCAACACTTCGCAAAACGTTTAATTCTTACTATACAGCAAGAATAGCTTTACTAAACTCTATTAGTAAAAAACTAAAAGACGGTATCACAGAGGCTATGAAAAAAGCATCCCAAGCATCACTAGATGCAACACAAGCAATGGCAGATGCCTCACAAGCTAAGATTGATGCAGATAATGCTAACAAACTTATATCTGATATAGCAAGTGATAACAAGCTAACACCTTCTGAAAAATACCAACTTAAAAAGGAATGGGATGTAATTGTTAAGGAATACCCTACAACAATTGCACAAGCAGAGAAGTACGCAGTAGACACAGCAGAGTATACAGCTAAATATAAAGCCCTAGAGCTGTTTGTAGAGCCTTTGTTTAAAGACATGGATGAAACTAGTATAGTAGACGGAGAACGCCTTAGAGCGACATTCTCGGACTATTACGCAAGTAAGATTGCTTTACTAAAAGAAGTAACGGACTCAGCTAAAACAGAGCTAGATGCCTATGGTAATAAAATATCTGTAATGGAAACAAACATTACTCAAACGTCAGAAGCTATTACTTTACTAGCTACTAGAGTACAAACTGTAGAAGACGGTGTACAATCAAATAAGGCACAAATCGAAATACAAGCTGAACAAATTAGTCAAAAAGTAACTGCTAGTGAGGTTAAAGGAATTGTAGACGATTCTATTAACAATCTAACATTAGGTGGAACTAACTTATTTGTTATAAAGACACAGACAGCAGGTTTACTAAACGAGAATGATGGAACTGTAGGTACTGCAGTAGACAACTCAGTAGTGTCAGACTACATTAAAGTTAATCAAAAAACACCATATATTGCTACACTTTATGGTAACACTGGCACAAACATGATTATAACAGACTGGTACGATAAAAATAGAACATTTATTTCTGGGGAAGCTGTGGCAGACTCTGGGGATTTTAGTAAAAAGTATGTGTCACCTGAGAATGCAGTCTATGCTAGGGTAAGTTATAAGAAAGCAAACTCTGTGAATATCAAATTCGAGGCAGGTACAAAGGCTACTGATTACAGCCCTTCATGGGAAGACATAAAAGGTGACCAAACTGCTTTAGAGGAATACATTAAAAAAGTAGAAGAACAAGCCAAGAAAGCTCAACAAGATGCTGAAAATGCTAAAAATGATGCTGAAAATGCAAATAACGCAATAGCTGACATGTCGAATGACAATATGTTAGCACCGAATGAGAAAAAACAAATACTCTTACAATGGGAACAGATTAAAACAGAGTATCCAATAAACTTAGACCAAGCAACTAAATTTGGGGTGTCTTCTCAACAGTATACAACAGCATATAACGCACTAGACGAGTACTTAAAACCAATACTAGCTGACATGACAACAACTTCTGTAGTAGTTGGCTCTACTTTAAGAAATACGTTTAACAATTATTATGACAAAAGAACTACTTTGCTAAACAGAATATCTGACGTAGCAAAAAATGTAGCAGACAAGGCACAAGAAACTGCAGATACTATCAATGATAATTTACAAAATATTGGTGGGTACAACTATGTAGGGTTCTCTTCCGGAGACAATATGTTGCCTAGACTGATGATTAAAAACGTTGGTTACTACACATTAGGTTCGTCAACCACAGAGTTCATTGACAGCATGGTAGCTGTAAAAGGTGATGCAACGACCCAACCTTTCGATTATACTGTAGGTACTTCTGATAAAGAAATTGCCGGTGGCGGTTTAGCTGATTATCGTATGAAAGAAGTAAAAGAAGGTCAGTGGCTAACAGCTTCTGCGAATGTGCAGGTAATAGGTGGTGGCTCCGCTAGGTTAGCTATCTACACTTTAGAAGGGGATAACTGGGTAGGTTCTAACAGTACACCTATACAAGTAAGTGATGGTTTGAAACGTGTTGTGGCTCAAAGAAAAGTAACAGGCTTAACAAAAGGTGTGTTAATACGTATTGAGTCAGCCGACACTAATGTTAAAGAGTTTCGATTTGGTAATGTTCAACTAGAAGTAGGTATTATCCCAACTCCTTGGAAAAAGTCTGATATAGATATTCAAGAGGACATAAACAATGTTGTTCAGAATATCAAAACATACACTGCTTGGGCTAACGATTTACAGGGTCTTGATTTTACAAGAGAAAAGGTTGAAGGAAAAACTTACATGTATGTAGGTACCTCTATGAAAGATAGTGATAACTATTCAGATTATACATGGAGGTTAACTGATGAGCATATAGAAGGTCAGATTAATGGTAAGGAAGGCGCATGGATTTATTCTCCAACAGCCCCTACTAACCCATCGCAAGGGCTTATATGGGTAGACTTGTCAAAAGTACCTAACCAACCTAAGCGTTGGGTAGACTCAGAAACTGGGTGGGTTGCGTTAACACCAGAAGAGGTTAAAGATTTACCTTGGGGTGAAGATGGCACAAGCTTAGCCGACTGGGTGTCACAGGCAGAGCAAAGAATATCTTCTGATAGCATTATAAATACTGTACTAGGTTCTGAGGATTTCACTAGTGTGTTCGATACAAAAGCTAACACTTCTGACCTAGGTAACTTAGCTACCTATGAAGACTTAGACTCAATAAAAGAGGACTATAACCGGCTAATCAAAGAAGGCATAAATGGTATTGATTTTACTCCTTATGTGACTAACTCCGAACTACAACAGCTTAAAGACAGCTTTAACTTCTCTGTTCAACAAGCCGGAGGGGTTAACATGCTTAAAAACTCTTTAGGATTCTCTGGGTTAGACTTCTGGAATGGTACAGTAGGGAAGAACTTACTACCTAACTCTACTTGGAATTTAGGTTTTGGTAGATGGGGTGGTACTTCAATCACTAGTTTTGAAATATTACCACCAGAAGATGACAAGCCTACGAGTAACATATTAGCCTCAATGCCACTTCGCTCTTCTACTAAAGAAATAGGTAACAAACCTCACCCATTAAAAGTTAACTCGGGTGAAACGTACACAGTAAGCTTCGACTATAAAGAAGAAGCATTATCTTACAACAAGGACAGACCTATCCTTGTTGTAAGAAACTACCCTGATAAGGACACAGACCAATGGATGGAGTACTCAATAGAAGGTTGGGCAGTAATGGCTAACGGAAGCACTACTGACTTGACTGTTTGGAGACGTTTTACAAAAACATTTACAATAGGTACTAGTGGCTACTTAGATATTTTACCGAAAACCATAATAGAATCGTGGGAACACAGGTCTTTTTGGAGAGAGCTAAAAATAGAGAAAGGGACACAAGCCACTACTTGGGTACCTAACAAGGAAGACGGGGCGTTTACTGGTGATATTGTTGAGACTATTCAAACAGAAGAATTAGCCAACCTCGGGTTTGGTTCCGGATTTATTAGTTCTAAAAGACCTAGCTCTTCATTAACACAATCTGTAGAACTACCTGAAATAGGTGCTAACCTTGAGTATTCACTATCTTTTTATATGAAGGTAACTACAGATAACCCTGTAGCTGACTTTAAATGCGGTATTCGGGTTTATGATGGAGGTACTCTAACTTATACATTAGGCATAGAAGATGCAACACAGCCAATACCACTAGGGTTCCAACAATACAAGCTTGTGTTCACTCCCACAAGTACCTCTACTAAAATAGAAATGTTTGTAGAAAATGGGCAAGAGGCATCTGTTATTATATCAGGTATTATGTATAATATCGGGAGTATACCTCTTAAATGGCAACCATATCCAAGTGAGATATACAATACGAATGTTAAGATTGATATTAATGGGGTAACCGTTAAAAACAATCAAACAGATGGGTATACAATGATTACTCCCCAAGAGTTTTCAGGATACTCTCGTATTGATGGTAACATAGAACGTATTTTCACTTTAAATGGACAGGTAACAGAAGTTAAAATGCTAAAGGCTGAAAAACGTATAACTATGGAACCAGTATCTGTATTCGCTATGAACACAGTAACGGATACAAAAAGAATTAGAGGTTGGGCATTTGTGCCATCATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac8fe9dbbc8ef1351e8dbe985640d320a21e9c339c013d1853fe63f872f358fd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparison of Enterococcus faecalis Biofilm Removal Efficiency Among Bacteriophage PBEF129, Its Endolysin, and Cefotaxime Myung,H., Oh,H., Hwang,Y. and Hong,H. — — GenBank