Protein

Genbank accession
ADO99520.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MARQGILAKAKPSAGTNTLLYSAPIDSSASTVLNVTAQGGSNTTFDVALKNYDQKLVVGASNHLLHEGDVITGYRFALSTAIPATAGLAAGTLLTSSDAESTARFESFYLPAFTEIDVRVRSIRAITLESVTGDFAVGETIVKGSGGNTATATIYAVAQGSGSTIVYVGPSTLAGSGSEFADGDALTASGGGTGTISSGGIATAADEFTFQPSGGTENLYLGTDLTLFTDRTYRFDVSDSTMSGRDFKLSTTVNGEYGPDNDFTDTSDNGEEYVTGKTTNGTAGSSGAYVQFDFSQDTSLNSNLYFYDGGTGTASNADFGGSDRYLATSNNYEYDEIYVYDVDGTWTNNVDGFEFNGTTYTVSSQTSGPYGYVRSYSGTDLYVIKGVGSADFAGSDTFQDNPKEGGGTRGTVTVSSVAVAVTAFETQEVIRKDNAITANTTEEIKSLVVGPGERLIVENAAADCSFVLIGFEDASTGFTTRTYSATVVAGAASGGG
Physico‐chemical
properties
protein length:496 AA
molecular weight: 51284,86090 Da
isoelectric point:4,18064
aromaticity:0,10081
hydropathy:-0,16028

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Syn19
[NCBI] 		445684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8109
[NCBI] 		166314 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99520.1 [NCBI]
Genbank nucleotide accession
GU071106 [NCBI]
CDS location
range 25829 -> 27319
strand +
CDS
ATGGCTAGGCAAGGTATTTTAGCAAAAGCAAAACCAAGCGCAGGAACTAATACGTTGCTGTATTCAGCACCTATTGATTCTTCTGCAAGCACGGTGCTTAATGTTACTGCTCAGGGCGGTAGTAACACAACTTTCGATGTTGCCCTAAAAAATTACGATCAAAAATTAGTGGTCGGTGCAAGTAATCACCTGTTGCATGAAGGTGATGTAATCACAGGTTATCGCTTCGCACTGAGCACTGCTATTCCTGCAACAGCAGGTTTGGCAGCAGGAACACTATTAACATCGTCTGACGCTGAATCTACTGCTAGATTTGAATCATTCTATCTTCCAGCATTTACTGAAATTGATGTTCGTGTTAGATCGATTCGTGCAATTACCTTAGAATCTGTAACTGGAGACTTTGCAGTTGGCGAGACTATTGTAAAAGGTAGTGGTGGTAATACGGCAACCGCTACTATCTACGCAGTTGCTCAAGGATCTGGTAGTACAATCGTTTATGTTGGTCCTTCTACCCTTGCAGGGAGTGGATCAGAGTTTGCTGATGGTGATGCACTGACTGCATCTGGTGGTGGAACAGGAACAATTTCTAGTGGTGGTATTGCAACTGCTGCTGATGAGTTTACATTCCAACCATCTGGTGGCACAGAAAATCTTTATCTTGGCACTGATCTTACATTATTCACTGATAGAACGTATCGTTTTGATGTTTCTGACTCCACTATGAGTGGTAGAGATTTCAAACTTTCAACAACAGTTAACGGTGAATATGGTCCTGATAACGATTTTACCGACACTTCTGATAATGGAGAAGAATATGTAACTGGTAAAACAACCAACGGAACTGCTGGTTCTTCTGGTGCATATGTTCAGTTTGATTTTAGTCAAGATACCAGTTTGAACTCTAACTTATATTTTTATGATGGTGGCACTGGTACTGCTTCAAACGCTGATTTTGGTGGTTCGGATCGTTATCTGGCAACATCTAACAACTACGAGTATGATGAAATCTATGTGTATGATGTTGATGGCACATGGACAAATAACGTTGATGGTTTTGAATTCAACGGAACTACTTACACTGTAAGTTCTCAGACTTCTGGTCCATACGGTTATGTTCGTTCATATAGTGGCACCGACCTTTATGTTATTAAAGGTGTAGGTTCTGCTGATTTTGCGGGATCTGATACCTTCCAAGATAACCCCAAAGAAGGTGGTGGAACTCGTGGCACAGTAACTGTCAGCAGTGTTGCTGTTGCTGTTACAGCGTTTGAAACACAGGAAGTAATTCGCAAAGATAATGCAATTACTGCTAATACTACAGAGGAAATCAAATCTTTAGTTGTTGGTCCTGGTGAAAGACTTATTGTTGAAAACGCAGCAGCGGATTGTTCATTCGTATTGATTGGATTTGAAGATGCATCTACAGGATTCACTACTAGAACTTACTCTGCTACGGTTGTTGCTGGCGCAGCGTCTGGTGGCGGTTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f27cd066bde209833ca7a79d8c4cacca905487ec54d1f65ce1cbc2aaa5bd3b7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4760
Evidence 0,4760
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn19 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank