Protein

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Genbank accession
AVZ45099.1 [GenBank]
Protein name
putative baseplate protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVETNANTINDLNPLYPRDRDYLYEGAAQIRLVKQVLQNTFPNVTEPVQLDSDSLNILASKVTFTGDSMDVGGLMIKNATPGTGDRDVVTKGQMEAFMQNWMANKVFRIGSYYITEEDINPGDSSSLGFGSWAKVTGVIMGSGVVNPDGSVPNAQRVEFQAGGTGGRVFNTIRADNLPLVTINGSSFSVSSNTHGHNMVFGRGDASGHNSSPNWYSPGGGYSQRTENDTHSHTISGSVSFGRDDVSRQPINTLPPFRSAHIWRRIS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 28893,61600 Da
isoelectric point:5,84068
aromaticity:0,08240
hydropathy:-0,43446

Domains

Domains [InterPro]
DC_0570
ATT
1–70
DC_0570 DC_0154
IPR053827
ATT
104–266
IPR053827
AVZ45099.1
1 267
Architecture
ATT
STR
ATT
ATT 1-70 | STR 71-103 | ATT 104-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVZ45099.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,6012
Central domain 184 256 74 0,0070
C-terminal 257 267 10 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-256
C-terminal
257-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EP335
[NCBI] 		2070199 Uroviricota > Caudoviricetes > Mktvariviridae > Nieuwekanaalvirus > Nieuwekanaalvirus EP335
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVZ45099.1 [NCBI]
Genbank nucleotide accession
MG748548 [NCBI]
CDS location
range 15844 -> 16647
strand +
CDS
ATGGCAGTAGAAACTAATGCTAACACAATTAATGACCTCAACCCCCTGTACCCTCGTGACAGGGATTATCTTTACGAAGGGGCGGCTCAGATTCGCCTCGTTAAACAAGTATTGCAGAACACTTTTCCAAACGTAACAGAACCAGTTCAATTGGACTCAGACTCTCTCAATATTCTGGCTAGCAAAGTTACTTTTACTGGTGACTCTATGGATGTTGGTGGGTTGATGATCAAGAATGCAACTCCGGGTACAGGTGATAGAGATGTTGTCACTAAAGGCCAGATGGAAGCTTTCATGCAGAACTGGATGGCTAACAAAGTATTCAGGATTGGTTCTTACTATATCACTGAAGAAGATATTAACCCCGGTGATAGTTCTTCTCTTGGTTTTGGCTCTTGGGCTAAAGTGACTGGTGTTATTATGGGTTCTGGTGTAGTAAACCCTGACGGTTCTGTTCCTAATGCTCAGCGTGTTGAATTCCAAGCAGGTGGTACAGGTGGTCGTGTGTTTAACACTATCCGTGCTGATAACCTACCTCTTGTAACTATCAATGGCTCAAGCTTCTCTGTATCTAGTAACACTCACGGTCACAACATGGTGTTTGGTCGTGGTGACGCAAGTGGTCATAACAGCTCCCCTAACTGGTATAGTCCGGGTGGTGGTTATAGTCAGAGAACTGAAAATGATACACACTCTCACACAATCTCTGGTTCTGTATCTTTTGGTCGTGATGATGTTTCTCGTCAGCCAATTAATACTTTACCACCTTTCCGATCTGCACACATCTGGAGACGTATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1ca2fb760e80081021bcd590438b40cd015ca4ba07b9022989a04b0c810cfe0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7140
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50