Protein

View in Explore
Genbank accession
QVW54939.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLTNDEIKRRYFEMGAPIDRHGNYQAIHRTEDATKQGFCTLLHYHLLNGMTDKAAMAALKGYDLSDVEVNFIMKKTKDFIADVLELPLDDIRKGLASTVGHLWREFNRILGELNTRYENLRYEDIVVGEHRYQATEKSRTALAGYIQSGVDPMYWIDAMNTPVEPFDLSNVKELYAAIIQRDNELHMALNVKKQKLRTLAEQNNFTAVMAMAKEENLA
Physico‐chemical
properties
protein length:218 AA
molecular weight: 25074,34820 Da
isoelectric point:5,82403
aromaticity:0,08716
hydropathy:-0,43486

Domains

Domains [InterPro]
DC_0377
STR
1–120
DC_0377 DC_0271
IPR025484
STR
115–198
IPR025484
QVW54939.1
1 218
Architecture
STR
STR 1-211 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_4
[NCBI] 		2835894 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW54939.1 [NCBI]
Genbank nucleotide accession
MW812338.1 [NCBI]
CDS location
range 144555 -> 145211
strand -
CDS
ATGCTTACTAATGACGAAATAAAACGTCGTTACTTCGAAATGGGTGCGCCAATTGACCGTCATGGCAATTACCAGGCGATTCACCGTACCGAAGATGCTACCAAGCAGGGGTTCTGTACCCTGCTGCATTACCATCTGTTAAACGGGATGACCGACAAAGCGGCAATGGCTGCGTTGAAAGGTTACGACCTGTCAGATGTCGAAGTCAACTTCATCATGAAGAAGACCAAAGACTTTATCGCCGATGTACTGGAACTGCCGCTGGATGATATCCGTAAAGGGTTGGCGTCCACGGTAGGGCATTTGTGGCGTGAGTTTAACCGTATTCTGGGTGAGTTAAACACCCGTTACGAAAACCTGCGCTACGAAGACATCGTGGTTGGTGAACATCGTTATCAGGCTACCGAGAAATCGCGTACAGCGCTGGCTGGCTATATCCAGTCCGGTGTTGATCCGATGTATTGGATTGATGCGATGAACACCCCAGTCGAGCCGTTTGACCTGTCAAACGTGAAAGAGCTGTATGCGGCGATTATCCAACGTGATAACGAACTGCACATGGCGCTGAATGTGAAGAAACAAAAACTTCGCACGCTGGCTGAGCAGAATAACTTCACTGCGGTGATGGCAATGGCCAAGGAAGAGAACTTGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e00159e6ccc18708d7c1a5c8523eb7593d35239c7e50efd07f7f34491b681fd7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9027
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_4 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank