Protein

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Genbank accession
YP_004323169.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MANQGLLAQNKPAANTNTLFYSAHVDKSASTMINVANDGTASDYSVALKNFDQKLVVNGSANAYKLHEYDVITAYKMTVDTAFDPAAQGFTGGLQITSADNESKFRYESAIIPDYVELFVKTFAIRQITIQSVTGTFSVGNTITKGSGSDTTTAVIYGINGTILHVGPSTINGSGAEFAAGDSISNGAGASATVATGGVGSASNKFVFSSTSGGTYDLRLISAGNGFELFNDRSYRFNLADSTNSGHVFALSTTINGEWGSDGTTGNSDDGTEYTTGKTTNGTIGSSGAYIQYAFTSTSPTLLYWYNSVTGTAANSSFGGSEAYLTTTSTPTFNEFYIYDVEGTWTNSTSTFVQNSITYTVTAQTSGAYGYVRSYSGNNLYVIKGLNSADFAGSDTFLDNPKLSTATRSTVTVNSVAVATTAVENNYIIQGATNADHAVAKNTSIVVGPGERLIINSTTQNNTFSLIGFEDSSTAFTPRTFGS
Physico‐chemical
properties
protein length:483 AA
molecular weight: 50604,47130 Da
isoelectric point:4,70362
aromaticity:0,10973
hydropathy:-0,15611

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-RSM4
[NCBI] 		444862 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323169.1 [NCBI]
Genbank nucleotide accession
NC_015283.1 [NCBI]
CDS location
range 24993 -> 26444
strand +
CDS
ATGGCTAATCAAGGTTTACTTGCACAAAACAAACCCGCAGCGAACACGAATACGTTGTTCTATTCTGCTCATGTTGATAAATCTGCAAGCACGATGATCAACGTCGCTAATGACGGAACAGCATCAGACTACTCTGTTGCTCTTAAGAATTTTGATCAGAAGTTAGTAGTAAATGGTTCTGCAAACGCATACAAATTACATGAGTATGACGTCATCACTGCATATAAGATGACAGTTGACACTGCCTTTGACCCTGCAGCACAGGGTTTTACTGGCGGTCTTCAAATTACGAGTGCTGATAATGAATCAAAGTTTAGATATGAATCTGCAATTATTCCTGATTATGTAGAACTTTTTGTAAAAACTTTTGCTATCAGACAGATCACGATTCAAAGTGTTACTGGTACGTTCTCTGTTGGTAATACTATTACCAAAGGTTCTGGTAGTGATACAACTACTGCAGTAATCTATGGTATTAATGGAACTATTCTTCATGTAGGTCCTTCTACTATTAACGGATCTGGTGCAGAATTTGCTGCAGGTGACAGTATTTCAAACGGTGCGGGTGCATCAGCTACAGTTGCAACTGGTGGTGTAGGATCTGCATCTAATAAATTTGTATTCTCTAGCACATCAGGCGGAACTTATGACCTTCGTTTGATTTCTGCAGGAAACGGTTTTGAACTATTCAACGATAGATCATACAGATTTAATCTTGCTGACTCTACTAACTCAGGTCACGTTTTTGCATTATCAACAACTATTAATGGTGAGTGGGGTTCTGACGGAACAACAGGTAACTCTGATGATGGAACTGAATATACTACTGGTAAAACTACTAATGGCACCATTGGTTCTAGTGGTGCATACATTCAATATGCTTTTACTAGCACTTCACCTACTTTGTTATACTGGTATAACTCTGTTACTGGAACTGCTGCTAACAGTAGTTTTGGTGGATCAGAGGCATATCTTACAACAACTTCTACCCCTACATTCAATGAATTTTATATCTATGATGTAGAGGGAACTTGGACTAACTCTACATCTACCTTTGTTCAGAACAGTATCACATATACTGTTACTGCTCAAACTTCTGGAGCGTACGGTTATGTTCGTAGTTACAGTGGTAATAACTTATATGTTATTAAAGGACTTAACTCAGCAGACTTTGCAGGTTCAGATACTTTCTTAGATAACCCCAAGTTATCTACTGCAACAAGATCTACTGTGACTGTAAATAGTGTTGCTGTTGCAACTACTGCTGTGGAAAATAATTACATTATTCAAGGTGCAACTAACGCTGATCATGCAGTCGCAAAGAATACTTCTATTGTTGTTGGACCTGGTGAAAGATTGATTATCAACAGCACTACACAAAACAACACCTTCTCCCTTATTGGGTTTGAAGATTCCTCAACTGCGTTCACTCCCCGAACATTCGGCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf68042c02b726882191f412ed09119bdd780fdcdefe1da76e8c60347bb84096
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 9303-10a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank