Protein

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Genbank accession
WYD67369.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSVPAHVNEVDGQAIAEKLAAQLRNNLGNPNNYQDPNKWRFNVGPGFIHIIAPNNDNVWGLQTKDGYADQLINPVTHYAQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFTYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNIVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89926,45940 Da
isoelectric point:6,10669
aromaticity:0,11735
hydropathy:-0,37191

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
WYD67369.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYD67369.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9940
Central domain 142 340 200 0,0877
C-terminal 341 801 460 0,1862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB4
[NCBI] 		3120038 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp. M5a1
[NCBI] 		2759708 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD67369.1 [NCBI]
Genbank nucleotide accession
PP197344 [NCBI]
CDS location
range 27285 -> 29690
strand +
CDS
ATGGCTCTCATTAGCCAATCAATCAAAAACCTCAAGGGTGGTATCAGTCAACAGCCAGATATTCTCCGGTTCGCTGAACAAGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCAGAGGGTCTCCAGAAGCGCCCACCGATGATTCACCTTAAGACCCTTGGCCCTGCTGGGTATGTGGGTGCGCAACCTTACGTTCACCTCATCAACCGTGATGAGTTCGAGCAGTATTTCGTTGTGTTCACTGGTGAAGACATTAAGGTATTCGACCTCGACGGTAAGGAGTACCAAGTACGTGGAGACCGCTCTTATGTGCGCACAGCTAACCCACGAGAAGACCTTCGGATGGTTACTGTGGCTGACTATACCTTTGTGACTAACCGCAAGGTTGTTGTGCAGAGTAACGACCAATCGGTCAACCTTCCGGGCTTTAAAGACCAAGGCGATGCACTAATTAACGTTCGAGGTGGTCAATATGGACGTAGACTCTCAATCGAGTTCAACGGGGCTGAGCGTGCTGCTGTGCAACTACCTGACGGCTCAGTGCCAGCACACGTTAATGAGGTTGATGGTCAGGCCATCGCTGAGAAGCTGGCGGCTCAGTTGCGGAATAACCTAGGGAACCCCAACAATTACCAAGACCCAAATAAGTGGCGCTTCAACGTTGGCCCCGGATTCATCCATATCATTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGATGGTTATGCAGACCAGCTAATCAACCCTGTAACCCATTACGCTCAGTCGTTCCAGAAGCTGCCTATTAACGCGCCAGATGGCTACATTGTGAAGATTGTTGGTGATACCTCAAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAACCGTAAGGTGTGGGTAGAAACAATCGGCTGGAACACAAGGACTCACCTTCACTACCACACGATGCCTTGGGCGCTGGTACGTGCTTCTGACGGGAACTTTGACTTCAAGTACCTTGAGTGGGGTGCTCGTACAGTGGGCGATGATACAACCAACCCATACCCATCGTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGTAACCGTTTAGGCTTCCTTAGCGGGGAGAACATCATCTTGTCTCGCACCTCGAAATACTTTAACTTCTTCCCGGCCTCCGTGTCAAACTACTCCGACGATGACCCAATCGACGTTGCGGTTAGTCATAACCGGGTGTCCACCTTGAAGTATGCCGTTCCGTTCTCCGAAGAGTTACTCCTGTGGTCTGACCAAGCGCAGTTCGTTCTGACAGCCTCTGGTATCCTTTCGAGTCGCTCCGTAGAGTTGAACCTTACGACTCAGTTTGATGTGCAAGACAGGGCGCGACCACACGGTGTTGGGCGTAATGTATACTTTGCGTCACCTCGAGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCGAATGGAGTATTCAGTATATCGGGTACAACCGCTGAGAACTTCGCGGCTATCCTTACGAGCGGAGCACCGAACCGAGTGTATATCTATAAGTTCCTCTACATTGACGAGGAAATCAGGCAGCAGTCATGGTCTCATTGGGACTTTGGAGACAATGTTACGGTGTTTGCAGCACAGGTGATAAACTCAACAATGACTGTATTGATGGGTAATGAACATGCTGTGTGGATGGGACGCTTACACTTCACGAAGAACTCCATAGACATTCCGGGAGAGCCTTACAGATTATACATCGACGCTAAGAGGAAATACACCATCCCTGCCGGGACGTATAATGATGATACCTACCAGACGTCCATAAGCCTCTCAACGATTTATGGGATGAACTTCACTAAGGGTAGGGTGTCTGTGGTCTTTCCTGATGGGAAGATTGTAGAGATAGACCAGCCAATCAACGGGTGGAGTAGCGACCCAATGCTGAGACTTGATGGAAACCAAGAGGGCCAAGTAGTCTACATTGGGTTCAACATCCCATTCACGTATACGTTCTCGAAGTTCCTTATTAAGAAGACCGCTGAGGACGGCTCGACTGCTACCGAGGATATCGGACGTTTACAGCTTCGGCGTGCATGGGTAAACTATGAGGATTCTGGCGCGTTCACCATCCGTGTGAACAACCTGTCCCGTGAGTTCACCTACACAATGGCTGGCGCTCGTTTGGGCTCTGACAATCTACGTGTTGGTAGGTCGAACATTGGCACAGGGCAGTACCGCTTCCCGGTGGTTGGTAATGCGCAGACGAACATAGTAACTATCGAGTCAGACGCATCAACACCACTGAACATCATTGGGTGCGGCTGGGAGGGGAACTACCTTCGTCGTTCTTCTGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
014dc3ebc0e7357a6754cad50efe039d85d312d5812ae9bd485b4ecc1c909b02
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank