Protein

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Genbank accession
YAS69539.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MQLFTSIQQALKLSDSRVPLLDNDRTIMSESSGTAFPTVDLVEGMPCFRTDEKKLYRYRKDGTGTLVWQLELDLNKTLAYQDDITALTTAVNTKLGTAGGSLTGFLLLHADPTNGKHPATKGYVDGIKSSTDSAIALKLDKTGGTLTGMLTLYDNPSQNMHAATKMYVDGSVNAATAGLSNKLNRNGDTLSEVYNSGWYRSNGNVGWYSQTYGGGICMTDTTWLRIYGGKGFLSDWHQLHPGGSIYTSAYGWLHDRFAQKGTFHHTFSVGNCGDSSALQVSVSGNNIALNLSSTNCNCNCNCGNI
Physico‐chemical
properties
protein length:305 AA
molecular weight: 32949,44880 Da
isoelectric point:6,69117
aromaticity:0,08852
hydropathy:-0,33705

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAS69539.1
1 305
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,6184
Central domain 119 294 177 0,1503
C-terminal 295 305 10 0,8858
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-294
C-terminal
295-305

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage vB_RsoP_BMB116
[NCBI] 		3455927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS69539.1 [NCBI]
Genbank nucleotide accession
PX020966 [NCBI]
CDS location
range 50299 -> 51216
strand -
CDS
ATGCAACTTTTCACGAGCATCCAACAGGCACTCAAGCTCTCCGACTCCCGGGTGCCGCTGCTGGACAACGATCGCACGATCATGTCGGAGAGCTCAGGCACTGCCTTTCCGACCGTGGACCTGGTCGAGGGCATGCCCTGTTTTCGCACGGACGAGAAGAAGCTGTACCGATACCGGAAGGACGGTACCGGCACGCTGGTCTGGCAGCTCGAACTCGACCTGAACAAGACCCTGGCCTACCAAGACGACATCACGGCGCTGACCACCGCGGTGAACACGAAGCTGGGCACTGCCGGTGGGTCGCTCACCGGCTTCCTACTGCTGCACGCGGACCCCACGAACGGGAAGCACCCGGCGACAAAGGGCTACGTCGACGGCATCAAGTCCAGCACGGACAGCGCTATCGCCCTGAAGCTGGACAAGACCGGCGGCACGCTGACCGGCATGCTGACGCTCTACGACAACCCGAGCCAGAACATGCATGCCGCCACGAAGATGTACGTGGACGGCTCGGTCAACGCGGCAACCGCCGGCCTCAGCAACAAGCTGAACCGCAATGGCGACACGCTGAGCGAGGTCTACAACAGCGGCTGGTACCGCTCCAATGGCAACGTCGGCTGGTACAGCCAAACCTATGGGGGCGGCATCTGTATGACCGACACTACCTGGCTGCGGATCTACGGCGGCAAGGGCTTTCTGTCGGACTGGCATCAACTCCACCCGGGCGGGAGCATCTATACGTCGGCCTACGGTTGGCTCCATGATCGTTTCGCCCAGAAGGGTACGTTCCACCACACCTTCTCAGTCGGCAACTGCGGCGATAGCTCAGCGCTGCAGGTGTCGGTGTCCGGCAACAACATCGCCCTGAACCTGAGTAGCACCAACTGCAACTGCAACTGCAACTGCGGAAACATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1cb06fe4d67690da27c0d879ddc9919816622bb32035ee0f138f9ccb3fac6ef
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7423
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50