Protein

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Genbank accession
QQG33365.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,66
Protein sequence
MQEMLVLPGDGDPKKYSTWFELDFTKYPLGTFSGFTDRGITFNRTAGTSATVLDEGLPAMDFVGDGALSGGTTPDKLLNNDWKITMNLKVKAAATNPMIFVGRSIQGNGSGTWIANMLSNGYLDWWYNSSRVNAGPAVTKGVYHEIIFESINKSLTVTVDGSPTINNKAIPDLADGTSFNLMIGGSQDQVLYHSRCLMRSIKIETKKR
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22716,53840 Da
isoelectric point:6,72857
aromaticity:0,09615
hydropathy:-0,23750

Domains

Domains [InterPro]
IPR013320
STR
58–190
IPR013320
PF13385
LEC
70–189
PF13385
G3DSA:2.60.120.200
STR
72–207
G3DSA:2.60.120.200
QQG33365.1
1 208
Architecture
STR
STR 58-207 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PcCB7V
[NCBI] 		2798043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG33365.1 [NCBI]
Genbank nucleotide accession
MW367417 [NCBI]
CDS location
range 45378 -> 46004
strand -
CDS
ATGCAAGAAATGTTGGTACTGCCGGGAGACGGAGATCCGAAAAAGTACAGCACTTGGTTCGAGTTGGACTTCACCAAGTATCCCTTGGGGACATTCTCAGGATTCACTGATCGCGGGATAACGTTCAACAGGACCGCCGGAACATCCGCGACGGTTCTTGACGAGGGCCTGCCAGCGATGGATTTTGTTGGAGATGGGGCATTGAGTGGGGGGACCACCCCAGACAAGCTGCTAAACAATGACTGGAAGATCACCATGAATCTGAAGGTTAAGGCGGCAGCAACAAACCCAATGATATTTGTGGGGAGATCTATTCAAGGAAACGGGTCTGGCACTTGGATCGCCAACATGCTGAGTAACGGATACCTTGACTGGTGGTATAATTCCAGCAGGGTCAATGCAGGCCCTGCCGTGACAAAAGGTGTTTATCACGAGATAATCTTCGAGTCTATTAACAAGAGCCTCACTGTAACTGTTGATGGATCGCCAACGATAAACAACAAAGCCATCCCAGATCTTGCAGACGGGACAAGTTTTAATCTCATGATCGGCGGTTCTCAAGACCAAGTTCTGTATCATTCCCGGTGCTTGATGCGCTCAATCAAGATTGAAACCAAGAAAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c336d3cc42473db2026786cb88293dfddfe69a90d782a5752cea3c7b1f0c8300
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of novel berlinvirus and novel certrevirus lytic for Pectobacterium car. car Petrzik,K., Kmoch,P., Vacek,J. and Brazdova,S. 2021-04-29 — GenBank