Protein

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Genbank accession
QKN88319.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSLFDVTAGSLIGPTTGGTVTQATNKGTGVTLNTQSGQITMNNAALADAAEVSFTVTNSKIAATDVVVACHGSAGTAGAYIVSANGIAAGSFKITVSNVSGGSLSEAIVINFVALKGASS
Physico‐chemical
properties
protein length:121 AA
molecular weight: 11684,93790 Da
isoelectric point:5,49789
aromaticity:0,04132
hydropathy:0,48678

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HS2
[NCBI] 		2740745 No lineage information
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN88319.1 [NCBI]
Genbank nucleotide accession
MT490303.1 [NCBI]
CDS location
range 26531 -> 26896
strand +
CDS
ATGTCTTCATTATTTGACGTAACAGCTGGATCACTTATTGGTCCAACTACAGGCGGCACTGTAACTCAGGCTACTAACAAAGGAACTGGTGTAACTCTGAATACTCAGAGTGGACAAATCACAATGAATAATGCTGCATTAGCAGATGCCGCTGAAGTATCTTTTACAGTTACTAACAGCAAAATTGCTGCTACAGATGTTGTCGTTGCTTGTCATGGTTCCGCTGGAACTGCAGGCGCTTACATTGTAAGTGCTAATGGCATTGCTGCTGGATCATTCAAGATCACAGTTTCTAATGTTTCTGGTGGTTCACTAAGTGAAGCTATTGTTATTAACTTTGTTGCTCTCAAGGGTGCATCAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6fcc4dfda2ccfe573da8efcfc030c399749837e5c792e386935ca95ce6dfdf63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Frequency of mispackaging of Prochlorococcus DNA by cyanophage Laurenceau,R., Raho,N., Forget,M., Arellano,A. and Chisholm,S.W. 2020 — GenBank