Protein

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UniProt accession
A0A1D3RL01 [UniProt]
Protein name
Phage long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
Protein sequence
MADSIKRKFRGAEGFDAAGEKIVNVATADRTVLSDGVNVEFLIQENTLQQYDSTRGYTSGFAVIYDNRIWVSNRDIAKPAGDFNELYWTSVRTDAKWRVVSSGTTILKSGEFISVDTAKGNDMIFTLPNNPQDGDTIMLKDIGNKTGTVGVTINASIQDIVLRDPTNKVRSVKMTHPLSQYVFVFSNRLWNLYVSDYERVARIVTPSSVVQAQSNDFIVRRYTSPDPIRVTLPKHANTGDIINFTDLDGKNPQFHMIVSTFDDNTNIGTVGQKSVEVRTSGDGFIVYDASESIWRIWEGDLRPRMRVITDNVTLIPNEVVTVFGVNNSTQKTIDITLPTDIAIGDTVTIAMNYMRKGQKVNIRAATGDKIASSLQLLQFPKRSEYPPDVAWVMNDVLTFDGTTSYVPVLQLSYIEHAGSKYWVVADNTPTVERVDSKDNETRKRLGVIALASQDQANVDHENNPEKELAITPQTLANRVATKVRRGIARLVTLTEIQALTPGPHLDDVIVTPAMLNEKTATETRRGVAETATQAEANGSTDDERIVTPKKLHNRIASETLTGILKLVRTIGTAAGIGRDTKGTNVYDYDNNIDAVTPKSLFQFKSTEQAQGGVYLATQNEVIAGGPAQPGFPVVVTPQTLHGKTTTDSRIGLIQIAKQAEVDEGTNYNKAVTPKTLNDRKAREDLSGIAEIATQTEFDTGTDDTRIVTPLKVKTRFNSTDRTSVVALSGLVEQGTLWDHYTLDIKEASETQRGTAALATQLQVDTGTDDKTIVTPKKLHAKKATETTEGIIQVANQSETVDGTVANKAISPKNFKYVVQEEKTWESTIARRGFVKLSEKALTFTGDTLNGSGRLLPGDLINEPALTDLPKEGYAVSPYEMNRALQYFLPAKAKAVDSDLLDGIDSTQFIRRDIDQVVNGKITFKKDVTLEAPLVSSSTAKFTTVNATISVDIGDSLGNSRINLNTLGNAWKVESLGNGTTLDFTATDKVLSLDRNGNVTVAQTLTAMNKVDASKGFSVEGGTMVINPSSSEIVIGTQSKQVTLQNKDANTFSVVDPSGTYTMLNTKNAFEITAQGFVKKAGDSMTGPLQIQAPLTVQIPEGRVAPDVKPSDDNPASWSASITSAAIYNKLPGFGVPVMEKDAEGQDTGFVDHYEYVKGPGVLTQHGIGKTAVYQIWAPRPTVQELNHNAQTFWIRNFNIVTGEWDEFGKMYTSVQRPTAGEIGAVSTSGSAFNNLTIRDWLQIKNVRIVPNETTRTVDFIWVDE
Physico‐chemical
properties
protein length:1264 AA
molecular weight: 138209,54830 Da
isoelectric point:5,45452
aromaticity:0,06883
hydropathy:-0,33568

Domains

Domains [InterPro]
DC_1986
ATT
12–137
DC_1986 DC_1209
IPR048391
ATT
1116–1211
IPR048391
A0A1D3RL01
1 1264
Architecture
ATT
STR
ATT
STR
ATT 12-137 | STR 345-1115 | ATT 1116-1211 | STR 1212-1254 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1D3RL01
1 1264
Domain Start End Length (AA) Confidence
N-terminal 1 977 977 0,9189
Central domain 978 1176 200 0,2204
C-terminal 1177 1264 87 0,3776
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-977
Central
978-1176
C-terminal
1177-1264

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage Pet-CM3-4
[NCBI] 		1892569 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Karamvirus
Host Cronobacter malonaticus LMG 23826
[NCBI] 		1159491 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Cronobacter > Cronobacter malonaticus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
SCN45945.1 [NCBI]
Genbank nucleotide accession
LT614807 [NCBI]
CDS location
range 153778 -> 157572
strand +
CDS
ATGGCAGATTCAATCAAACGCAAGTTTCGTGGCGCAGAAGGCTTCGATGCTGCGGGTGAAAAAATAGTCAACGTTGCTACTGCTGACCGCACGGTGTTATCCGATGGCGTCAACGTTGAATTCCTTATCCAAGAAAACACATTACAACAATATGATTCTACTCGTGGTTACACTTCTGGCTTCGCAGTAATCTATGATAACCGCATTTGGGTATCAAATCGTGATATCGCAAAACCTGCTGGCGATTTTAATGAGCTTTACTGGACTTCAGTTCGTACTGACGCAAAATGGCGTGTAGTTTCAAGCGGAACCACAATTTTGAAATCAGGTGAATTTATTTCTGTCGATACCGCAAAAGGTAATGACATGATTTTCACCTTACCAAATAACCCGCAAGATGGCGATACAATTATGCTGAAGGACATCGGTAATAAAACCGGTACCGTTGGTGTAACTATCAATGCATCTATTCAAGACATTGTGCTGCGTGACCCTACGAATAAAGTTCGCTCAGTCAAAATGACTCATCCACTGTCTCAGTATGTGTTTGTGTTCAGCAATAGATTGTGGAATCTTTATGTTTCTGATTACGAACGTGTTGCTCGTATTGTAACACCGAGTTCAGTCGTTCAAGCTCAATCTAATGACTTTATAGTTCGCAGATATACTTCTCCAGACCCAATCCGTGTCACTTTGCCTAAACATGCAAACACTGGAGATATCATCAACTTTACTGACCTTGATGGAAAGAACCCTCAATTCCATATGATTGTTAGTACTTTCGATGATAACACTAACATCGGTACTGTTGGTCAAAAATCTGTAGAAGTTCGTACTTCTGGCGATGGATTCATTGTATATGATGCTTCAGAGTCAATCTGGAGAATTTGGGAAGGTGACTTGCGTCCACGCATGCGCGTAATCACCGACAACGTAACTTTAATTCCAAACGAGGTTGTTACTGTTTTTGGTGTAAATAACAGCACTCAGAAAACTATTGATATCACTTTACCTACTGATATTGCTATTGGCGATACTGTCACTATTGCAATGAATTATATGCGCAAAGGCCAGAAAGTAAATATCAGAGCAGCTACTGGAGATAAAATTGCTTCAAGTCTTCAATTACTGCAATTCCCTAAACGCTCAGAGTATCCGCCTGATGTAGCTTGGGTAATGAATGATGTTCTTACTTTTGATGGTACTACTTCATACGTTCCAGTATTGCAATTATCTTATATTGAACATGCTGGAAGTAAATACTGGGTTGTGGCTGATAATACTCCGACCGTAGAGCGTGTTGATTCTAAAGATAACGAAACTCGTAAACGCTTAGGCGTTATTGCTTTAGCAAGTCAAGACCAGGCAAACGTTGACCATGAAAATAATCCAGAAAAAGAGTTAGCAATTACTCCTCAAACTTTAGCAAACCGTGTTGCTACTAAAGTTCGTCGTGGTATTGCTCGTTTAGTTACTTTAACTGAAATCCAAGCTCTAACTCCTGGCCCGCATTTGGATGATGTTATTGTCACTCCTGCTATGCTGAATGAAAAAACAGCAACAGAAACTCGTCGCGGTGTAGCTGAAACTGCTACTCAAGCTGAAGCAAATGGTTCAACTGATGATGAAAGAATTGTTACTCCGAAGAAGCTGCATAACCGTATTGCTTCTGAGACGTTGACTGGTATTCTTAAATTAGTAAGAACTATTGGAACTGCGGCGGGTATTGGGCGTGATACAAAAGGTACTAACGTTTATGACTATGATAACAACATTGATGCGGTAACTCCAAAATCATTGTTCCAATTCAAGTCTACTGAGCAAGCTCAGGGCGGTGTTTATCTTGCAACTCAAAACGAAGTAATTGCTGGCGGTCCAGCTCAACCTGGTTTCCCAGTGGTGGTTACTCCACAGACACTTCATGGTAAAACTACTACAGATTCAAGAATTGGATTAATCCAAATCGCTAAACAAGCTGAAGTAGATGAAGGAACTAATTACAATAAAGCAGTTACTCCAAAGACTCTGAATGACCGTAAAGCTCGTGAAGACTTAAGTGGTATTGCTGAAATTGCAACTCAGACTGAATTTGATACCGGAACGGACGATACACGTATCGTAACTCCATTAAAGGTTAAAACTCGTTTCAATTCAACCGATAGAACATCTGTTGTTGCTCTGTCTGGATTAGTTGAGCAAGGAACCTTGTGGGACCATTATACATTAGATATCAAAGAAGCATCTGAGACCCAGCGTGGAACCGCTGCCCTGGCTACTCAATTGCAGGTTGATACTGGTACTGATGATAAAACAATCGTTACGCCTAAGAAATTGCATGCTAAGAAAGCTACTGAAACTACCGAAGGTATTATTCAAGTTGCTAATCAATCTGAAACGGTAGACGGTACTGTTGCTAATAAAGCAATTTCTCCGAAGAACTTTAAGTATGTTGTCCAAGAAGAAAAAACTTGGGAATCTACTATTGCTCGTCGCGGATTCGTTAAGTTATCAGAAAAAGCACTCACCTTTACGGGTGATACTTTAAATGGTTCTGGTCGTCTGCTTCCAGGTGACTTAATTAACGAACCTGCTTTAACAGATTTGCCTAAAGAAGGTTATGCGGTATCTCCATATGAGATGAACCGAGCGCTGCAATACTTCTTACCAGCTAAAGCAAAAGCTGTTGATTCTGATTTACTTGATGGAATTGATTCAACGCAATTCATTCGCAGAGATATTGACCAAGTAGTTAATGGTAAAATTACATTCAAAAAGGATGTTACTCTAGAAGCTCCTCTGGTGTCCTCTAGTACTGCCAAATTCACTACCGTGAATGCTACTATATCTGTTGATATTGGTGATTCTCTGGGTAATTCTAGAATCAATTTGAACACATTAGGGAACGCATGGAAGGTAGAGAGTCTTGGTAATGGAACAACTCTTGATTTCACTGCCACAGATAAAGTTCTGTCACTTGACCGTAATGGAAACGTAACGGTTGCTCAGACTTTAACAGCAATGAACAAAGTTGATGCTAGTAAGGGCTTTTCAGTTGAAGGTGGTACAATGGTTATTAATCCTTCCTCTTCTGAAATTGTCATTGGTACTCAATCTAAGCAAGTAACGCTTCAGAATAAAGATGCTAATACATTCTCAGTAGTAGACCCTTCTGGTACATACACAATGTTGAACACTAAAAATGCTTTTGAAATAACGGCTCAAGGATTCGTTAAGAAAGCAGGTGATTCAATGACTGGGCCACTTCAAATTCAAGCTCCATTAACTGTTCAGATTCCTGAAGGACGAGTTGCTCCTGATGTTAAACCGTCAGACGATAACCCAGCCTCATGGTCTGCATCAATTACATCAGCAGCAATTTACAATAAATTGCCTGGTTTCGGTGTTCCAGTTATGGAAAAAGATGCTGAAGGACAAGATACTGGTTTCGTAGACCATTACGAATATGTTAAAGGTCCTGGTGTATTAACTCAACATGGTATTGGTAAGACTGCGGTCTATCAAATTTGGGCACCTCGCCCAACTGTACAAGAGTTAAACCATAATGCTCAGACTTTCTGGATTCGTAACTTTAACATCGTCACTGGTGAGTGGGACGAATTTGGTAAGATGTACACTTCCGTTCAGAGACCTACTGCAGGGGAAATTGGTGCTGTATCAACCTCAGGTTCAGCGTTCAATAACTTAACGATTCGTGATTGGTTGCAGATTAAGAACGTTCGTATTGTTCCTAATGAAACTACTCGTACTGTTGACTTCATATGGGTTGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1db577474697483a2affddc427204b87893921a6e469bb9f196c302497a0a39d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50