Protein

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Genbank accession
AXC39389.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MTQRTTRNDPTKWSDANTGIFHPADDAIGFTTAGTERVRINNGTLTLFQTTATPAATPVIRFDNASNTNVGISASSNIISLSSMNKIQVEFKNGESHFHGNIIVDGSTSLTGDLNAGNITASGI
Physico‐chemical
properties
protein length:124 AA
molecular weight: 13069,21250 Da
isoelectric point:5,80129
aromaticity:0,05645
hydropathy:-0,27661

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC39389.1
1 124
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0200
Central domain 11 113 104 0,0693
C-terminal 114 124 10 0,7949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-113
C-terminal
114-124

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CMSTMSU
[NCBI] 		2267248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC39389.1 [NCBI]
Genbank nucleotide accession
MH494197 [NCBI]
CDS location
range 344932 -> 345306
strand +
CDS
TTGACCCAACGAACAACCCGTAATGACCCAACTAAGTGGTCCGATGCTAATACTGGTATATTCCATCCAGCAGATGATGCAATTGGTTTTACAACAGCCGGAACTGAGCGTGTTCGAATTAATAATGGAACACTAACATTATTCCAAACTACCGCTACACCAGCAGCTACGCCAGTAATACGTTTTGATAATGCATCAAACACAAACGTAGGGATAAGTGCAAGTAGTAATATTATTTCTTTAAGTTCAATGAATAAAATTCAAGTTGAATTTAAAAATGGTGAATCACATTTTCATGGAAATATTATTGTAGATGGATCAACATCACTAACAGGTGATTTAAACGCAGGTAACATCACTGCCAGCGGAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
83c130c3c2034de8420ea38aaa11a5a2ed01c1b6ac5ec23c353c0e81da7e2e81
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7439
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Escherichia phage CMSTMSU Lelin,C., Thirumalaikumar,E., Abinaya,A., Paul,S., Rashmi,R., Arun,A., Sudhakar,S. and Citarasu,T. 2018-10-11 — GenBank