Protein

View in Explore
Genbank accession
XUJ68856.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKADDYRQLRAATVADDLFIANLSVKPEADRTDVKGVDPNKTGWLYIKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTATRAVLHRYSVNFGWTGEFLWRISDTARPNQPWYDTTPLWLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 92030,75840 Da
isoelectric point:5,92401
aromaticity:0,10896
hydropathy:-0,31707

Domains

Domains [InterPro]
IPR058003
TTP
1–816
IPR058003
DC_0058
STR
1–826
DC_0058
XUJ68856.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUJ68856.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9875
Central domain 141 339 200 0,2360
C-terminal 340 826 486 0,3046
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaFZ4
[NCBI] 		3421746 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUJ68856.1 [NCBI]
Genbank nucleotide accession
PV610699 [NCBI]
CDS location
range 9233 -> 11713
strand -
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGTGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCGACGATTACAGGCAGCTACGGGCCGCTACGGTGGCTGACGACCTGTTCATCGCCAACCTGAGCGTGAAGCCTGAAGCCGACCGCACCGATGTCAAGGGTGTGGACCCCAACAAGACTGGCTGGCTGTACATCAAGGCAGGGCAGTATTCGAAGGCATTCTCCCTGACCATCAAGGTCAAGGACAACGCCACGGGCACCACCTACAGTCACACGGCCACCTACGTGACACCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAGCTCTACGGCAAGTTCTTCGGGGCGCCGGAGTACACCCTGCCCAACTCCACGAAGAAATACCCGAAGGTAGACCCGGACGCCAACGCGGCAACCATAGCCGGTTACCTCAACCAACGGGGCGTGCAGGACGGGTACATCGCGTTCCGTGGCGACGCCGATATCCACGTTGAAGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGTGGTATGAGCCTCAATGCTACGGCGGACCTGCCGGCCTTGCTGCCGGGAGTCGGCGCCCCTGGTGTGGGGGTGCAGTTCATGGACGGCGCTGTCATGGCCACCGGCTCTACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCGGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCCTTGGCCCTGCGCTGGGACGAAGCCACCGATACCTACAGCTTGAACGAGCTGGACTATGATCGGCGGGGCTCCGGCGACGAGGACACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACAACCTTCCAGGGTCGCCTCGTTCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAACCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCCGCTCAGGGTAGCTTGACCGAGCCGTACGAGCATGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTACCAGGCCGTGGTCCCAGGTGGTGGCATAGTGACCCCACGAACAGCCGTCATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGACGCAGCGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCACGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTCCAGAACGCCTTCCACCGATGGACGCTGCGGCATCAGATCATCGGCGCGTACTTCACCGGCGACAACCTGATGGTCCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGGATGCACCTGAACAGCCTGCCAGCCCGCGAGGGTCTGCAATATCCGAAGTACGATTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTATACCAGCTCCAGCCCGTGGCCGGTGCCTACATGGAACGTACCCACCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTAGTCGGTGCCGTGTACGTGGTCGGCTGTGAGTTCTGGTCCAAGGTGGAGTTCACTCCGCCGGTGCTACGGGACCACAACGGGCTGCCCATGACTGCAACCCGCGCAGTGCTCCACCGGTACAGCGTGAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGACACGGCCCGCCCTAACCAGCCGTGGTACGACACGACGCCCCTGTGGCTGTTCAGTCGGCAACTCAACGCCGGCGAGCCACTGGTGGATAGTGCCGTGGTGCCGCTGCCGGCCAGGGTGGACATGGCCACGTCCAAGTTCGAGTTGAGCTGCCATAGTCCGTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAATCTACCGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0bb5dfe2c1095d64ab4a1ec331865ea62b00fa7afe1c91c9d1c1ce99c547c04
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3073
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50