Protein

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Genbank accession
QXV84568.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKIIVEYDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWMGFDREGNTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCYVSNVDFSLDKSVPILNVGIESGKFSEVSTFTPAGSIVQGEVISYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKRFAGDTFYNIEPETDIPLTIRNEHISIDFPSARITKRLQFSDIYRVEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34481,23700 Da
isoelectric point:4,97798
aromaticity:0,14047
hydropathy:-0,31706

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
QXV84568.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV84568.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,9140
Central domain 11 209 200 0,0445
C-terminal 210 299 89 0,5375
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SuperGirl
[NCBI] 		2851993 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus supergirl
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV84568.1 [NCBI]
Genbank nucleotide accession
MZ501105 [NCBI]
CDS location
range 9346 -> 10245
strand +
CDS
ATGTATTACTCTCTAATGCGAGAGTCAAAAATTATAGTTGAGTATGATGGCAGAGCGTATCACTTTGACGCTCTGTCAAATTATGATATTAATACCTCCTACGAGGAATTTAAAACTCTTCGTAGGACTATCCATCGTAGAACCAACTATGCTGACTCTATTATTAATGCACAAACTCCATCTTCAATATCGCTGGCTATAAATTTTAGTAATACCCTTACTGAAGCTAACTTCTTTGAATGGATGGGCTTTGATAGAGAGGGTAACACATTCTTACTACCACTTTATAGTACAAATATTGAGCCAACAATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTATACTTCGAGAATTGCTACGTATCTAATGTAGATTTTTCTCTAGATAAAAGTGTCCCTATCCTAAACGTAGGGATTGAATCCGGTAAATTCTCTGAGGTGTCTACTTTTACTCCTGCTGGTTCTATTGTTCAGGGTGAAGTTATATCATATAGTCCTCCTAGAGTATCTACCAACAGTAATGTTTTACCAGCTCTTTTATCTGCTTCTATGTCCTTCCAGCAACAATGTTCTTGGAGAGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAAATGAATGCTTCGGCAACAATTGCATTTTACTATACCAAGCGATTTGCTGGTGATACGTTTTATAATATTGAACCCGAAACTGACATCCCATTAACCATCCGAAATGAACATATTTCTATTGATTTTCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATATATACAGAGTTGAATGGGATGTAATCCCTACTGCAGACTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1fef841e294d79828c0ae293930db41406dc085deb508de0d0124a26c5713821
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8343
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank