Protein

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Genbank accession
XAO54249.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYRIQDLDAVDGNLVAGDFLLVKMKARGSAVADEDRKLPFQNFMDSLGLNTYAKKAGDTFIGPVILNNNVPLQLKGTNGTAYNAAMMNPQNFMIFGGASSGVKFQSQSILSVIRSGVEYKLYSEFNKPTTAELGVYSKDESDAKYLQMSGGTITALKIESSTLPSLVLSAIGSGQAATKTTLLELQLDGSVKLIGRGAGAIGANLSDITFPKGVTGTVYTTGNNPTLSALGAAKSGINSDITALTNLTGPLRVGADGISLLDAVTVQQLNNYVSSPANMMTTDTAQDVTGIKTITNKLMTGTSAVIDFRNAASVQVSAPATNNEVANKKYVDDVNNAPLTGDVVIPTDKGLYIKDSGGTNKGVAKVTTDGAILGDVSTPLVLTSSANPSLSTPFGSYTFYHTGNRPTLDTVYPNGPFPLKQDAVAQSDAVTLRQLQIATAGNTGGATMNGVMNNFIGSVEWFNGTRARLPVGHISSDGQILVRAENPELWAAVKSGMLLAVADSLWLSGPLYHGVYSYGDGDVNTGTTFRAPDLNGVYVNSADATKSSIRGLFLRGDGHSGSGLGGGSGAVRPDGAPNIVGSVTNVYGGSGDSTRSLFGAVDGAFVSYGNVTNAANMPTVPASGTGSPKIGINASLSHLAYGRTIPSGGTAADEVAPAHAVGIWLIRSKGIFDAQTELHVITSDAIYPTSAGTVMTSGQTVSDYKAAGVVRNRASFGSQQVVGGSAYGFINAEQVNASGVAEKGAVFKFGSDGNLSAPNEIVHRGGKIVALSTIVYPNGTEASPALLPAGYRNTFASPYPDRVCDGRLEVLYNGEWGEAGMGSNAGSGSVAFGAAIFFKTTAAGVQAYTVWAGANGVVGSFNVVGGAWDTANNTSVSNLPYRIRIWTID
Physico‐chemical
properties
protein length:891 AA
molecular weight: 91914,78720 Da
isoelectric point:5,74213
aromaticity:0,07520
hydropathy:-0,01796

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO54249.1
1 891
Domain Start End Length (AA) Confidence
N-terminal 1 339 339 0,5463
Central domain 340 538 200 0,2935
C-terminal 539 891 352 0,9637
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-339
Central
340-538
C-terminal
539-891

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_P778
[NCBI] 		3141559 Viruses >
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO54249.1 [NCBI]
Genbank nucleotide accession
PP693300.1 [NCBI]
CDS location
range 39797 -> 42472
strand +
CDS
ATGGCTGATTACAGAATTCAAGATTTGGATGCTGTTGACGGCAATCTTGTTGCGGGTGACTTTCTACTTGTTAAAATGAAAGCAAGAGGTTCAGCAGTAGCAGATGAAGACCGTAAACTTCCTTTCCAAAACTTTATGGACTCCCTTGGATTAAACACATATGCAAAGAAAGCTGGTGATACATTCATTGGCCCCGTCATTCTAAACAATAATGTCCCTCTCCAACTCAAAGGTACAAATGGTACAGCCTACAACGCTGCCATGATGAATCCCCAAAACTTTATGATTTTTGGTGGGGCAAGTTCTGGTGTCAAATTCCAATCTCAAAGTATTCTTTCTGTTATTCGCAGTGGTGTTGAGTACAAACTCTATTCAGAGTTTAACAAACCAACTACGGCTGAGTTGGGGGTATACTCTAAAGACGAGTCTGATGCTAAATATTTACAAATGTCTGGTGGGACAATTACTGCCCTGAAGATTGAAAGTTCTACACTGCCAAGTTTAGTTCTCTCTGCTATTGGCTCTGGACAAGCGGCTACTAAGACAACTCTTCTTGAACTCCAGCTTGATGGCTCAGTTAAGCTGATTGGGCGTGGTGCGGGTGCTATTGGGGCAAACCTATCAGATATTACTTTCCCTAAAGGTGTGACAGGTACTGTTTATACAACGGGCAACAACCCTACACTATCTGCACTCGGTGCTGCTAAGTCTGGCATCAACAGTGACATCACTGCATTGACTAACTTAACAGGCCCATTGAGAGTTGGAGCTGATGGTATCAGTCTGCTAGATGCGGTCACTGTGCAGCAATTGAACAACTATGTAAGTTCACCTGCAAACATGATGACGACTGACACTGCACAGGATGTTACTGGTATCAAGACAATCACCAACAAACTTATGACAGGGACTTCAGCAGTTATTGACTTTAGAAATGCTGCCAGTGTGCAAGTTTCTGCACCTGCGACAAACAACGAAGTTGCTAACAAGAAGTATGTTGATGATGTGAACAATGCACCATTAACAGGCGATGTTGTTATCCCAACTGATAAAGGTCTTTACATTAAGGACTCAGGTGGCACTAATAAGGGTGTTGCAAAAGTAACCACTGATGGCGCTATTCTTGGTGATGTGAGTACCCCACTGGTTCTAACTAGCAGTGCTAACCCATCATTATCAACGCCATTCGGAAGCTACACGTTCTATCACACAGGTAACAGACCAACATTGGACACTGTTTACCCAAATGGCCCATTCCCACTTAAGCAGGATGCTGTTGCTCAGTCTGATGCTGTAACTCTTCGTCAACTTCAGATTGCCACTGCTGGGAACACTGGTGGTGCAACAATGAATGGTGTTATGAACAATTTCATTGGCTCAGTTGAGTGGTTTAATGGTACACGTGCAAGATTGCCTGTTGGACACATCTCATCTGATGGACAGATTCTTGTTCGTGCAGAAAACCCAGAATTGTGGGCTGCTGTAAAATCAGGAATGCTACTGGCTGTTGCGGATTCATTGTGGCTGAGTGGCCCACTTTATCATGGCGTTTACTCTTATGGTGATGGTGACGTTAATACAGGGACGACTTTCCGTGCTCCTGACCTGAATGGTGTTTATGTTAACTCAGCAGATGCTACAAAGAGTTCTATCAGAGGACTTTTCCTACGTGGGGATGGTCACAGTGGTTCTGGTCTTGGTGGTGGTTCTGGTGCAGTCCGTCCAGATGGTGCGCCAAACATTGTGGGTAGTGTAACCAACGTATATGGTGGTTCTGGTGACTCTACTAGGTCACTTTTCGGGGCTGTTGATGGTGCTTTCGTCAGTTATGGTAATGTCACCAATGCTGCTAACATGCCTACAGTACCTGCTAGTGGTACTGGCTCACCTAAGATTGGTATCAACGCGAGCCTCTCTCACCTCGCTTATGGGCGAACTATCCCATCTGGTGGCACTGCTGCTGATGAGGTTGCACCAGCACATGCTGTTGGTATCTGGTTAATTCGCTCCAAAGGCATCTTTGATGCACAGACTGAGTTACACGTTATCACATCTGATGCAATCTATCCAACATCTGCTGGTACTGTAATGACATCTGGTCAGACTGTATCTGACTATAAAGCTGCTGGAGTAGTCCGTAACAGGGCATCATTTGGTTCACAGCAAGTTGTCGGTGGTTCTGCTTATGGCTTTATTAACGCTGAACAAGTAAACGCTTCAGGTGTTGCTGAAAAGGGTGCGGTCTTCAAGTTTGGCTCTGATGGTAATCTCTCAGCACCTAATGAGATTGTGCACAGAGGTGGGAAGATTGTTGCACTGTCAACGATTGTCTACCCTAACGGGACAGAAGCAAGTCCAGCACTCTTACCTGCTGGTTACAGAAATACCTTTGCAAGCCCATACCCAGACAGAGTTTGTGATGGACGCTTAGAAGTTCTCTATAACGGGGAATGGGGCGAGGCTGGTATGGGGAGTAATGCAGGTTCAGGTTCTGTTGCATTCGGTGCTGCTATCTTCTTCAAGACAACTGCTGCTGGAGTTCAAGCGTACACAGTCTGGGCTGGTGCTAATGGTGTTGTTGGTTCATTCAACGTTGTTGGTGGTGCATGGGATACTGCAAATAACACCTCAGTATCAAACCTACCATACCGTATTAGAATCTGGACTATTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6e8c81ecf2311558ee6a6fcb6ff850768c97f9526ea649e12cfa0a68da393dd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5966
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia phage vB_YenM_P778 Hammerl,J.A. 2003-08 — GenBank