Protein

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Genbank accession
YP_006383794.1 [GenBank]
Protein name
lysozyme like domain
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAENIVESIIVKLGLDGSQYNREAEKAKSNNDKLNKSVSETDKIVGNVTKTLARWFSVAAAATGILKMVDQVQKLNDELYHLERNLGMSASTIKNWQGAAGAMGGSAQGMTESIKSLNMGMNDFVTMGDTTLLPFMNALGVGMVDAQGKLRKTDDVMLDLADSFSKMDREQAFSIASKMGIDEGTFNTLVQGRKEMEKMLEYQSKMYKSSEEELKASRQLAQNRALLGQHWESLKTMMANAIIPLFVKLSEVALGIFEYLQENQQAVQAVFKGISFVVGAILIPILAKATIAALAFIAPFAPFILVVGALGAAFGLLYDDYKTWAEGGKSLFDWGAFKKYIDDSTLSVDNLKNAFSNLGKDMLNNAIPTLKGYAEILDKLVSGNFKGAALQAWDMLKNYYSRAADFVDDLTGQEQGTLANTVGNLVNPSAPPATGNAQVTYKSKAFTPEKAASIARVAKNIGVNPNDLAAVISFETGGTFDPSKRNPNSSATGLIQFMAGSGGTKGKYYGMTRDQFGSLSFDEQIKYVEKYFLERSSRFRAGNETKNTTGDVYGAVTGYGYKKGSREYELNKVWDSNKNGIIEKGEMVQNPSFRAHQRQYFDMSNLAAVQQSTRQGDFIDLTKARQNQAMANKANEVQVNVGDINIQTSSSTVTGNVQDAMGAIKDQFYQFRNSFN
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73905,90750 Da
isoelectric point:7,60906
aromaticity:0,09172
hydropathy:-0,29512

Domains

Domains [InterPro]
DC_0145
STR
1–676
DC_0145
Coil
Unmapped
17–37
Coil Coil G3DSA:1.10.530.10 IPR018247
IPR023346
STR
453–560
IPR023346
YP_006383794.1
1 676
Architecture
STR
STR 1-676
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AP22
[NCBI] 		1187128 Uroviricota > Caudoviricetes > Obolenskvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006383794.1 [NCBI]
Genbank nucleotide accession
NC_017984 [NCBI]
CDS location
range 21265 -> 23295
strand +
CDS
ATGGCTGAAAATATTGTTGAGTCGATAATTGTAAAGCTTGGGTTGGACGGCTCACAATATAATCGTGAAGCCGAAAAAGCCAAGTCAAATAATGACAAGCTAAATAAGTCTGTCAGCGAAACCGATAAGATCGTTGGCAACGTAACAAAGACTTTAGCGCGGTGGTTTAGTGTAGCTGCCGCCGCTACTGGCATTCTTAAAATGGTTGATCAAGTTCAAAAGCTTAATGACGAGCTTTATCATCTTGAGCGCAATTTGGGAATGTCAGCAAGCACTATCAAGAATTGGCAAGGCGCTGCTGGCGCAATGGGCGGTTCTGCTCAAGGCATGACTGAGTCAATCAAATCCCTAAACATGGGAATGAATGATTTTGTCACAATGGGCGATACTACCCTATTGCCATTTATGAATGCTTTAGGCGTTGGCATGGTCGATGCTCAAGGCAAACTAAGAAAAACCGATGATGTGATGTTGGACCTTGCGGATTCATTTTCAAAAATGGACCGCGAGCAAGCATTTTCTATTGCCTCAAAAATGGGAATTGACGAAGGTACATTCAATACGCTTGTACAAGGGCGTAAAGAAATGGAGAAGATGCTTGAATATCAGTCTAAGATGTACAAGTCCTCCGAAGAAGAATTAAAAGCATCTCGCCAATTAGCGCAAAACCGAGCATTGCTTGGTCAGCATTGGGAATCACTTAAAACAATGATGGCAAATGCTATCATCCCGTTATTTGTGAAGCTTAGTGAAGTTGCGCTTGGTATATTTGAATATCTTCAAGAAAACCAACAAGCAGTACAGGCGGTATTCAAAGGCATATCATTTGTAGTTGGCGCTATCCTCATACCAATTCTGGCAAAGGCTACTATTGCGGCTTTAGCGTTTATCGCTCCATTTGCTCCATTTATTTTAGTTGTAGGTGCATTGGGTGCGGCATTTGGCTTGCTTTATGACGACTATAAAACTTGGGCAGAAGGTGGCAAGTCCTTGTTTGATTGGGGAGCATTCAAAAAGTACATTGATGATTCGACTTTATCTGTTGATAACTTGAAAAATGCTTTCAGCAATCTAGGCAAAGACATGCTGAATAATGCAATACCAACGCTTAAAGGCTATGCTGAAATTCTTGATAAATTAGTATCTGGTAATTTTAAAGGTGCAGCCTTACAGGCTTGGGATATGCTTAAAAACTACTACTCAAGAGCCGCCGACTTTGTTGATGACTTGACTGGTCAAGAACAAGGAACGTTAGCCAATACTGTTGGTAATCTTGTGAATCCGAGCGCCCCTCCTGCAACTGGAAATGCTCAAGTGACTTATAAATCAAAAGCATTCACACCAGAGAAAGCTGCTTCTATTGCGCGTGTAGCTAAAAATATTGGTGTTAATCCTAATGATTTGGCTGCTGTTATTTCATTTGAGACTGGCGGAACTTTCGATCCTAGTAAGAGAAACCCGAACTCTTCTGCAACTGGATTAATTCAGTTCATGGCAGGATCTGGTGGCACTAAAGGAAAATACTATGGCATGACTCGTGACCAATTTGGCTCACTGTCTTTTGATGAACAAATAAAGTATGTTGAGAAGTACTTTTTGGAGCGTAGTAGTAGATTTAGGGCTGGTAATGAGACTAAGAATACTACCGGTGATGTGTACGGTGCTGTAACTGGCTACGGATACAAGAAAGGGTCAAGAGAGTATGAGTTAAACAAAGTATGGGACTCAAATAAGAATGGCATAATCGAGAAAGGCGAAATGGTGCAAAACCCATCATTCAGGGCGCACCAACGACAATATTTTGATATGTCAAACTTAGCTGCTGTTCAGCAATCTACTCGTCAAGGCGACTTTATTGACTTAACCAAAGCTAGACAAAACCAAGCAATGGCAAACAAGGCTAATGAAGTCCAAGTAAATGTAGGTGATATTAACATCCAAACATCATCTAGTACCGTTACTGGAAATGTCCAAGATGCAATGGGTGCGATTAAAGACCAATTCTATCAATTCCGAAATTCATTTAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
182a3f2bcce7e34c6ec2fea19f225e19d66f8dc221d887103850bcb6e9f1d7b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7448
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genome sequence of bacteriophage AP22 lytic for Acinetobacter baumannii Volozhantsev,N.V., Popova,A.V. and Bogun,A.G. 2012-05-08 — GenBank