Protein

View in Explore
Genbank accession
UYE97273.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPLTRIDSAFLDLDAIGGIDFDVQSGVPTLKVDAVNHRVGIGENSPSSKLHVTNVGDPNVIYKNSGNNSLDRNNTLSFRYSDGEGAFVKATRPSGGAASSTYLAFGSGGNTEQVRITSDGEVGIGTNSPISPLDILLDAGAGDPRIRFDQVSDDPFIELNRWTGTGTAYYGIRSRSRGADLIFEFADSSTTIGNHSYSEKVRINSNGNVGIGTDNPDTLLNLFGTGNTTVKVQNNSATSGTFSRLQLITGGVGSSARSEIRSFRMSSASAATNLALFTTTAGDTSATERLRIGSTGNVGIGTNDPQEKLHVARTVLVTGNTPQIRLNANDSDASDNDRTMLGQATGSANFVNTSADNDTVLRGTATGNLLFGIGTTEKLRIASSGNVGIGTDNPSEQLHVYKPSGSDVKIKIENTATNSYPTLRLTNDARTYDLQIDGATDSFRIYDSTASAQRLTIKSDGNVGIGVDNPLTKLHVLGQGIISTDSATQTNDYATLIIGERAAADSIASLEFRYNADDFSSKIDGRNRQFAVWANWNSSSNDRMVVDGTSTTETISLKPGGTVDVFKAEHNTSTGALATYFKGTANFQRVDTANEGGEIRFARSVDNANHYAIDVYGGSTTNPRLRLVNVTASREDFTLTHTGNVGIGINSPGAKLHVESAATTAGWQIRTDSVGLSNESGFYRDASDHYEVVIRNGLGGLSYVKNDGGASTANLRFNVQGGERLTILSDGNVGIGTATPGYKLHVEGRALFATGLQTSTISSSDLNSRTNIHSGFYQADATTTANGWPFTGWAHLTSNTHTNTTNYYSQQFASSFYNQELYFRNTNASGTTASQSWGQVMHTNSTLKPVFAESSGVTDAYSRYWYPGGEYYVGVHGITAPGDMNNFLEQGYYHVANNTSNNPTGNYGYLNVHRHAGSHYSLQHFIVSSDTSRQWMRASYPDGSQSSGRNWYQWYSYGALERENTFTNRQNLIGPTSTSTFTGLHAPTSSNRAQFVLHSDYSDLVISSAQNNTNGHGSTLTFAASNPSNAADYNKFVINKGNWGNRTQMLTFGYEDAEYTNPHTYINSGDNVMTLDGANKRVGIGAKADGFTPVYPLDVNFDGDSGARLKSYTSHSSLYIDAASGNGGYIRFRQAGSDKFWITNDSSNNLNFRPNGGGTTVQFQNGGLAIFHNKVEMKRAGVTGGNIPTYTQGAIEIKTESNGVPAIGFHRSGYSATTLYENTERLYINQNVGSEQDGQIVVSSPSFDQNLFIRNTSPTIYLRDTDHNSAMLHTNSNLFYVLRGGNDTTSWQQVNGKWPLICNLTNNNVTIGGNGYVNGTTSITSDERLKTNIQSITGALETVKALRGVTYYRTDIEPDKLKSGLIAQEIEPVLPHIVDETVQQDPDTGEVLEDTRFKCVAYEELHPYLIEAIKEQQVLIEALTARIEALENP
Physico‐chemical
properties
protein length:1433 AA
molecular weight: 154570,03160 Da
isoelectric point:5,53790
aromaticity:0,08793
hydropathy:-0,47509

Domains

Domains [InterPro]
DC_1386
STR
17–154
DC_1386 DC_1386 DC_1042 cd19958 DC_1572 DC_0203
DC_1815
STR
138–273
DC_1815 DC_1815 DC_1815 IPR030392
IPR030392
CHP
1325–1427
IPR030392
UYE97273.1
1 1433
Architecture
STR
STR
RBD
RBD
STR 17-544 | STR 546-954 | RBD 955-1284 | RBD 1298-1433
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE97273.1
1 1433
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,0323
Central domain 13 211 200 0,1110
C-terminal 212 1433 1221 0,9192
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-1433

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM54
[NCBI] 		1137744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97273.1 [NCBI]
Genbank nucleotide accession
OP053362.1 [NCBI]
CDS location
range 83251 -> 87552
strand +
CDS
ATGCCCTTAACCCGTATTGATTCTGCGTTCCTTGACCTAGATGCAATAGGCGGGATAGATTTTGATGTGCAGTCGGGAGTTCCGACATTAAAAGTTGACGCGGTAAATCACCGAGTGGGTATTGGAGAGAATAGTCCCTCGTCAAAACTCCACGTCACAAACGTTGGTGACCCTAATGTAATTTATAAAAACTCAGGTAATAATTCTTTAGATAGAAATAATACTTTATCTTTCCGGTATTCTGATGGTGAAGGAGCGTTTGTAAAAGCTACAAGACCAAGTGGTGGTGCCGCTTCAAGTACATATCTTGCATTTGGATCTGGTGGTAATACAGAACAAGTTCGTATAACTTCTGATGGCGAGGTTGGCATCGGAACTAATAGTCCGATATCTCCACTTGATATTCTTTTAGATGCTGGAGCAGGTGATCCGAGAATTAGATTTGATCAAGTATCCGATGATCCATTTATTGAATTAAATAGATGGACTGGTACAGGGACTGCTTATTATGGAATTCGATCTAGATCTAGAGGAGCTGATTTAATATTTGAATTTGCTGATAGCTCAACAACTATCGGTAATCATTCATATTCAGAAAAAGTTCGTATAAATTCTAATGGTAATGTTGGCATTGGAACTGATAACCCAGATACCTTACTTAATCTTTTTGGAACTGGAAATACAACAGTCAAAGTTCAAAACAATTCTGCAACTTCTGGGACATTTTCAAGACTACAACTTATAACCGGAGGAGTAGGATCATCTGCCAGGTCTGAAATTAGATCGTTTCGGATGTCTAGTGCTTCTGCTGCAACAAATCTTGCATTGTTTACAACTACTGCTGGCGATACAAGTGCAACCGAAAGACTTCGTATAGGTTCTACTGGTAATGTTGGTATTGGAACTAATGATCCTCAAGAAAAGTTACATGTAGCAAGAACTGTGTTGGTAACTGGCAATACGCCACAAATCAGACTAAATGCTAATGATTCTGATGCATCTGATAATGATAGAACGATGCTTGGTCAGGCAACGGGTTCTGCTAATTTTGTAAATACTTCGGCTGATAATGATACTGTTCTTAGAGGCACTGCAACTGGTAACTTATTATTTGGTATCGGTACGACGGAAAAACTTCGTATAGCTTCTAGTGGTAATGTTGGTATCGGAACTGATAATCCTAGCGAGCAACTTCATGTTTATAAACCTAGTGGCTCTGATGTAAAAATAAAAATTGAAAACACGGCTACTAATTCATATCCTACTCTTAGGCTCACAAACGACGCCCGTACGTATGATTTACAAATAGACGGAGCAACCGACTCTTTTAGAATTTACGATAGTACTGCTTCTGCGCAAAGGCTTACTATAAAATCTGACGGTAATGTTGGCATTGGAGTTGATAACCCGTTAACAAAATTACACGTGCTTGGCCAAGGCATAATCTCTACAGACTCTGCTACACAAACAAATGACTACGCAACACTTATAATCGGAGAAAGGGCCGCCGCAGATTCTATTGCGTCTTTGGAGTTTAGATATAACGCAGATGACTTTAGTTCTAAGATCGATGGCCGAAACAGACAATTTGCAGTCTGGGCAAACTGGAATAGTAGTAGTAATGATAGAATGGTGGTTGATGGGACAAGTACTACAGAAACTATATCACTAAAACCAGGTGGAACAGTTGACGTATTTAAAGCTGAACACAATACTTCTACTGGGGCTTTAGCTACATACTTTAAAGGCACTGCCAACTTCCAAAGAGTCGACACAGCAAACGAAGGTGGAGAAATCAGGTTCGCAAGATCTGTAGATAATGCTAATCATTATGCTATCGATGTCTATGGCGGCTCTACAACAAACCCAAGACTCCGACTCGTTAACGTTACGGCATCTAGAGAAGACTTTACTCTTACGCATACTGGAAATGTTGGTATTGGAATTAATTCCCCAGGAGCAAAACTGCATGTCGAATCAGCAGCAACCACGGCCGGTTGGCAAATAAGAACAGATAGTGTTGGCTTGAGTAATGAAAGCGGGTTCTATCGCGATGCCTCTGATCACTACGAGGTGGTAATCAGAAACGGCCTTGGTGGTCTTTCGTATGTTAAAAACGACGGCGGGGCTTCTACTGCAAATCTTAGATTCAACGTACAGGGAGGCGAGCGTCTTACCATACTTTCTGACGGTAATGTGGGTATTGGCACGGCCACCCCTGGCTACAAACTTCATGTCGAAGGAAGAGCTCTTTTTGCTACTGGTCTACAAACATCGACTATCTCGTCAAGCGATCTAAACAGCCGAACAAACATTCACTCTGGTTTTTATCAGGCAGACGCAACTACAACTGCAAATGGCTGGCCATTTACCGGCTGGGCTCATCTTACCTCAAACACTCACACCAACACCACCAACTACTACTCCCAGCAATTTGCCAGCAGCTTCTATAACCAAGAGCTATACTTCCGTAACACTAACGCTTCCGGCACAACAGCGTCTCAGTCCTGGGGTCAGGTGATGCACACCAACTCTACCCTCAAACCTGTGTTTGCTGAGTCTAGTGGTGTTACAGACGCATATAGCAGATATTGGTACCCTGGCGGAGAATATTATGTTGGTGTTCATGGAATCACTGCCCCCGGCGACATGAACAACTTCCTCGAGCAAGGTTATTACCACGTTGCAAATAACACTTCCAACAACCCAACCGGCAATTATGGATATTTAAATGTCCATCGGCATGCCGGATCTCACTACTCCCTCCAGCATTTTATTGTGAGCTCGGATACCAGCAGGCAGTGGATGAGAGCTTCGTATCCTGACGGCAGCCAATCAAGCGGAAGAAACTGGTACCAATGGTACAGCTACGGAGCCCTTGAAAGGGAAAACACATTTACAAACCGCCAGAACCTTATTGGCCCTACTTCTACGTCTACATTTACAGGACTTCACGCTCCAACATCATCTAACAGAGCCCAGTTTGTTCTGCACAGCGACTACTCCGATTTGGTTATCTCGTCGGCACAAAATAACACAAACGGCCACGGCTCTACCCTAACCTTTGCTGCTTCAAACCCCAGTAACGCGGCCGATTATAATAAGTTTGTAATTAATAAAGGCAACTGGGGTAACAGAACCCAGATGTTAACCTTCGGCTACGAGGACGCCGAATACACTAACCCCCATACCTATATCAACTCTGGCGATAACGTCATGACTCTTGATGGGGCGAATAAGAGAGTTGGTATTGGAGCTAAAGCTGATGGATTTACCCCGGTTTACCCACTAGATGTTAACTTCGATGGAGATAGCGGCGCTAGACTTAAGAGCTACACTTCTCATTCGAGTTTGTACATAGACGCTGCTAGCGGCAATGGAGGTTATATCAGATTCCGCCAAGCAGGATCGGATAAATTCTGGATAACTAATGACTCCAGTAATAACTTAAACTTCAGACCCAATGGCGGCGGCACCACTGTTCAGTTCCAGAATGGCGGCCTTGCTATCTTCCATAATAAGGTCGAGATGAAAAGAGCCGGTGTAACTGGCGGTAATATTCCAACCTACACTCAAGGCGCTATAGAAATTAAAACAGAGAGCAATGGAGTGCCGGCAATAGGCTTCCACCGTAGCGGTTATTCTGCTACTACTCTTTACGAAAATACTGAAAGACTATATATCAACCAAAATGTCGGCAGTGAACAAGACGGACAAATTGTTGTTTCTAGTCCGTCCTTCGATCAAAACCTGTTCATAAGAAACACCTCCCCCACCATATATCTGAGAGACACTGACCACAACTCCGCGATGTTGCACACCAATAGCAACTTATTCTACGTATTGAGAGGAGGAAATGATACAACGAGCTGGCAGCAAGTAAACGGCAAATGGCCACTTATTTGTAACCTTACTAACAATAACGTTACTATCGGCGGAAACGGATACGTCAATGGAACCACCTCTATTACTTCGGATGAAAGACTAAAAACCAACATTCAGTCGATTACTGGAGCTCTAGAAACAGTTAAAGCACTTAGAGGCGTAACGTACTATCGAACAGACATAGAGCCAGATAAATTAAAATCTGGATTAATTGCCCAAGAAATTGAGCCCGTCCTCCCGCACATTGTTGACGAAACCGTACAGCAAGACCCTGACACAGGAGAGGTGCTAGAAGATACGAGGTTTAAGTGTGTTGCTTACGAAGAACTCCACCCTTATCTCATTGAGGCAATTAAAGAACAACAGGTCCTTATCGAGGCGCTTACAGCTCGCATTGAAGCCTTAGAAAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
049b5a3a7673d80fc5702b162a4d77e083065cb9e8b438a80a915cda9e6048c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5326
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank