Protein

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Genbank accession
XCO37285.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKTFDFESLQNLANQIKADSEAAGASATAAAASESKAKTSETNAKASETAAKTSENNAKSSETKAKTSETNAKASETAAKTSETNAKASETAAKTSETNAKSSENKAKTSETNAKASETAAKTSETNAKASETAAKTSETNAKASETAANSAKTDAQTANGQTQNLRDQVVDLVAGVQAPDKLPRTPTESARSWMKIANVKRTAGSFTFAQFIVGGGADYGNVNLPVDLFSISGRGLPATLSSSNIDANFTQVGLLPYAGNESSRVRFGVVQLEDDSFDVYLFANTRYVPPLWINRINIQAGGDRITGPIIDRTGFSWITTEPTGIVYNNPIKYLRSDDNTIPRTNVANTFSQPQAISVPGGNATLTLNGATIRANDAGAIVYALTSGAPGMYFRPNGDTNSAKQVVFDATNFTVTGLNASFSNAVTMSSTLRVNGSSNLRGGVDVTASQGLPLKETTATTGIGVNFIGDNATECSFGIENTAGGSAVFHNYARGASNSVTKNNQLLGGYGSRPWLGSEYTEHSNAALHFLGAGDTSGTNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGVMHSDLGLVRSFETLNAAISGFNAPTNQDGRGLKLVGSPAPEINMIAPRAGLTSAPAIRAMWCDGDLSGTSRSVGATQAGSSFYVGASGHDSEKFDSMRVAISFSAVQGWGTTNTPTDISFETTPVGSTGRRAAWRIGAGGAFAPATDNSFDIGGASVRVKQVYAVNGTINTSDARLKNDVRMMSDPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAIEIMESFGLEPFKYGFICHDEWEEQTVVSEYGSLNEDGTEKPIYKTIPAGDRYSFRLEELNLFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:982 AA
molecular weight: 103708,64050 Da
isoelectric point:5,25672
aromaticity:0,07332
hydropathy:-0,30458

Domains

Domains [InterPro]
DC_0313
STR
1–980
DC_0313
IPR036388
RBD
836–981
IPR036388
cd10144
CHP
850–972
cd10144
IPR030392
CHP
850–909
IPR030392
IPR030392
CHP
850–980
IPR030392
XCO37285.1
1 982
Architecture
STR
STR 1-981 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO37285.1
1 982
Domain Start End Length (AA) Confidence
N-terminal 1 335 335 0,6292
Central domain 336 534 200 0,5230
C-terminal 535 982 447 0,8978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-335
Central
336-534
C-terminal
535-982

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146005
[NCBI] 		3232190 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO37285.1 [NCBI]
Genbank nucleotide accession
PP889460.1 [NCBI]
CDS location
range 20581 -> 23529
strand -
CDS
ATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGCGACTCGCTGACCGTTGACGGTCTGGCGCAAGATGTTGCTGAAACCCTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCAGATGCAGTCGAGTTCTTTAAGACGTTTGATTTTGAGTCGCTGCAAAATCTTGCCAACCAAATTAAGGCAGACTCAGAAGCTGCTGGCGCGAGCGCTACGGCTGCGGCGGCGTCTGAAAGCAAGGCGAAGACTTCAGAGACCAATGCAAAGGCGTCAGAAACAGCCGCGAAAACCTCGGAGAATAACGCCAAATCATCTGAAACTAAGGCTAAAACCTCAGAGACTAACGCCAAAGCATCCGAAACAGCAGCGAAAACCTCGGAAACTAACGCCAAAGCATCCGAAACCGCTGCAAAAACATCGGAGACGAACGCAAAATCGTCTGAAAATAAAGCTAAAACCTCGGAGACCAATGCAAAGGCATCCGAAACCGCAGCAAAGACCTCGGAGACTAATGCAAAGGCGTCCGAAACTGCGGCAAAGACCTCGGAGACTAATGCAAAGGCGTCCGAAACTGCGGCCAACTCCGCGAAGACCGACGCGCAAACTGCAAATGGGCAGACGCAAAATCTTCGTGATCAGGTTGTAGATCTTGTGGCTGGCGTGCAAGCTCCCGATAAACTTCCTCGCACCCCTACCGAATCGGCTCGTTCGTGGATGAAGATCGCCAACGTCAAAAGAACTGCTGGCAGCTTCACGTTCGCTCAGTTTATCGTTGGCGGCGGCGCTGATTACGGGAATGTAAATCTTCCGGTTGATTTGTTCTCTATCTCAGGAAGAGGGCTTCCAGCGACGCTATCTAGTAGCAACATTGATGCAAACTTTACCCAAGTTGGGCTACTGCCATATGCGGGCAATGAGTCATCGCGTGTTAGATTTGGTGTCGTCCAACTGGAAGATGATTCATTTGATGTTTATCTTTTCGCAAATACCAGATACGTTCCGCCGTTGTGGATTAATCGAATCAACATTCAGGCGGGCGGTGATCGGATTACCGGGCCGATCATCGATCGCACTGGTTTTTCGTGGATTACCACGGAGCCAACGGGGATTGTATATAATAACCCCATTAAGTATTTGCGGAGCGATGACAACACAATCCCGCGCACCAACGTAGCTAACACGTTCAGTCAACCGCAAGCGATCAGCGTGCCTGGCGGAAACGCTACGCTTACCCTGAACGGTGCAACCATCCGGGCAAATGACGCAGGAGCCATTGTTTACGCGCTAACTTCCGGCGCTCCTGGGATGTACTTCCGCCCTAATGGTGATACGAACAGCGCAAAACAGGTTGTTTTTGATGCAACAAACTTCACTGTTACCGGGTTGAACGCCAGCTTTAGTAATGCCGTCACAATGTCAAGCACGCTACGCGTTAACGGATCTTCTAACCTTCGCGGCGGTGTGGATGTTACCGCGTCTCAGGGCTTGCCATTGAAGGAAACGACCGCGACAACCGGGATTGGTGTTAACTTTATCGGCGACAACGCAACGGAATGCTCTTTCGGGATTGAGAATACTGCTGGCGGTTCCGCCGTGTTCCATAACTATGCGCGAGGGGCGTCCAATAGCGTAACAAAGAACAATCAGCTTTTAGGTGGTTATGGTTCTCGCCCGTGGTTAGGATCTGAATACACGGAGCACAGTAACGCGGCGTTGCATTTCTTGGGCGCTGGCGATACATCTGGAACCAATCACGGAGGCTGGATTCGCTTACTTGTCACCCCTAAAGGTAAGACTATTAGCGATAGGGTCCCGGCATTCAGGCTGTCGGATAATGGAGATCTTTGGCTGGTTCCGGACGGCGTTATGCACTCAGATCTTGGCCTGGTGCGTAGCTTTGAAACGCTAAACGCTGCTATTTCTGGCTTTAACGCTCCAACTAACCAGGATGGTCGCGGGTTGAAACTTGTTGGATCTCCAGCGCCAGAAATTAACATGATCGCGCCGCGAGCCGGGTTGACATCAGCACCAGCTATTCGTGCCATGTGGTGCGATGGCGATCTTTCAGGAACCTCAAGAAGCGTTGGTGCAACTCAGGCTGGCTCATCTTTCTATGTTGGTGCGTCTGGTCATGATAGCGAGAAGTTCGACTCCATGAGGGTTGCAATTTCATTTAGTGCCGTTCAGGGTTGGGGGACGACCAATACACCAACTGATATCTCTTTCGAGACAACCCCTGTTGGGTCGACTGGTCGGAGGGCAGCATGGAGAATCGGCGCTGGCGGTGCATTTGCTCCGGCTACCGATAACTCATTTGACATTGGCGGGGCATCGGTTAGGGTTAAGCAAGTTTACGCCGTCAACGGGACAATTAACACCTCCGACGCTCGGCTGAAAAATGATGTTCGCATGATGAGTGATCCTGAAACGGAAGCGGCCAAAGCTATCGCGAAGGAGATCGGTTTCTGGACGTGGAAAGAGCAAGCCGATATGAACGACGTTCGTGAGCACTGCGGCCTGACCGTTCAGCGGGCGATCGAGATCATGGAAAGTTTTGGGCTTGAGCCGTTCAAATATGGCTTCATTTGCCATGACGAATGGGAAGAGCAAACGGTGGTTTCTGAATACGGTTCGCTTAATGAAGATGGGACGGAAAAACCGATCTACAAAACCATTCCGGCTGGCGACCGTTATTCGTTCCGCCTTGAGGAGTTGAACCTGTTTATCGCGAAGGGATTCGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
76789574d3f551149a2d9eef9ba8095c06e14a2b99daa8de16d58c787d18752e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5802
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank